Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30166
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 29 3.0
SB_43818| Best HMM Match : NDT80_PhoG (HMM E-Value=7.6e-12) 29 3.0
SB_21071| Best HMM Match : efhand (HMM E-Value=0.48) 28 4.0
SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 28 5.3
SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35) 28 5.3
SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30) 27 6.9
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_1068| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 6.9
SB_56989| Best HMM Match : DUF1103 (HMM E-Value=2.4) 27 9.2
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_1051| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 446 LKQKQPEDSKRPVAEPTETTSTN 514
++Q Q + SKRP P ETTS N
Sbjct: 182 IEQSQADRSKRPYDPPVETTSNN 204
>SB_43818| Best HMM Match : NDT80_PhoG (HMM E-Value=7.6e-12)
Length = 347
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 446 LKQKQPEDSKRPVAEPTETTSTN 514
++Q Q + SKRP P ETTS N
Sbjct: 170 IEQSQADRSKRPYDPPVETTSNN 192
>SB_21071| Best HMM Match : efhand (HMM E-Value=0.48)
Length = 151
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 386 DVNSEGSWVYEKDVLKITFPLKQKQPEDSK--RPVAEPTE 499
DVN +G VY KD L+ F L K +DSK RP +PT+
Sbjct: 112 DVNGKGRIVY-KDFLR-HFVLAMKPQDDSKLIRPKLQPTK 149
>SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05)
Length = 315
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 251 DKYQISIHLPGYEQKDINVKAKNGVLMVQANSAFNH-YLKIQNLPW 385
D Y++ + EQ+D N K G VQ FN+ Y I+ L W
Sbjct: 22 DDYEVDENSDDEEQEDPNDYCKGGYHPVQLGDLFNNRYSVIRKLGW 67
>SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35)
Length = 552
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 386 DVNSEGSWVYEKDVLKITFPLKQKQPEDSK--RPVAEPTETTST 511
DV+ +G VY KD L+ F L K +DSK RP +PT+ S+
Sbjct: 423 DVDGKGRIVY-KDFLR-HFVLAMKPQDDSKLIRPKLQPTKVPSS 464
>SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4554
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 119 VRESMLDTHSLWSNLANEMQHLDNMMKELSL 211
+ ES L+TH + NLA E+ LDN E++L
Sbjct: 4396 IAESQLETHDVL-NLAYEITELDNSPPEIAL 4425
>SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30)
Length = 1043
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 356 HYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQP 463
H+L+I LP +VNS+ ++ D + + P+ P
Sbjct: 839 HHLRISPLPINVNSQSGSTFQADCIIYSEPVDDSAP 874
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 27.5 bits (58), Expect = 6.9
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +2
Query: 131 MLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEG----RVEGDKYQISIHLPGYEQKD 298
M T+ W L + H D +KE SLK + NEG R EG + + K+
Sbjct: 497 MCKTNFCWICLIDFKDH-DRCLKEQSLKEVELTNEGTTTARFEGFLEIVRRNTFYRLPKN 555
Query: 299 INVKAKNGVLMVQANSAFNHYLKIQNLP 382
I K K L+ +++ H I N P
Sbjct: 556 IGGKVKRLKLLAAGVNSYKHIAPIINPP 583
>SB_1068| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 422
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 70 WLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRN-ATLG 186
W+V L+ P+ PL S KH+ F C++N AT+G
Sbjct: 368 WMVFLSC-PVNPLVYAYSSKHIRDAFKRGLKCKKNTATIG 406
>SB_56989| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 835
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 8 MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPFSPYVRESMLDTHSLW 154
M+ ++ G+ VS HG ++ PY YDP P + LD ++LW
Sbjct: 65 MLLMIEKGIRGGVSMISNR-HGEANNPYMKEYDPDLPTKYITYLDANNLW 113
>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 8 MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPFSPYVRESMLDTHSLW 154
M+ ++ G+ VS HG ++ PY YDP P + LD ++LW
Sbjct: 801 MLLMIEKGIRGGVSMISNR-HGEANNPYMKEYDPDLPTKYITYLDANNLW 849
>SB_1051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 166 GKVGPKRMCVQHAFPNV 116
GK GP+ +C+ + +PNV
Sbjct: 80 GKFGPEELCLSNVYPNV 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,375,475
Number of Sequences: 59808
Number of extensions: 331352
Number of successful extensions: 1097
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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