Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30166
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.12
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.28
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 27 6.0
AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical... 27 6.0
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 27 6.0
AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arr... 27 6.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.0
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 17 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 106
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 458 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 354
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 30.3 bits (65), Expect = 0.85
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 338 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 514
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 510 VEVVSVGSATGLLLSSGCFCFSGKVI 433
+ V+SV TGL+L G FC +G I
Sbjct: 463 LSVISVVEMTGLMLVMGAFCVTGGAI 488
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 344 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTST 511
S F Y K+++ D + ++ Y+K T P+ QK + S A T ST
Sbjct: 5 SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCST 60
>AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical
protein Y105E8A.25 protein.
Length = 418
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 35 LAAVSAAPQYYHGSSHWPYHHYDPFSPYV 121
L A+S ++ S H PY+HY P S V
Sbjct: 181 LPAISEESEHEQQSIHIPYNHYPPHSSSV 209
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +2
Query: 62 YYHGSSHWPY---HHYDPFSPYVR 124
YYHG W + HHY PF VR
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVR 555
>AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arrest
at two-fold protein6 protein.
Length = 375
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 208 VEVPQHYKRRTRGRRQVSDIYSPAWLRTERHQRESEKWSAD 330
+EVP+ + G+RQ I R RE EKWSAD
Sbjct: 145 IEVPE-VSQSEEGQRQKLQIVVQTANRILGQPREQEKWSAD 184
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 395 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTN 514
+E S + DV KI PL+Q Q + VA P+E T +
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQAD 3406
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 395 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTN 514
+E S + DV KI PL+Q Q + VA P+E T +
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQAD 3406
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 395 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTN 514
+E S + DV KI PL+Q Q + VA P+E T +
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQAD 3406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,447
Number of Sequences: 27780
Number of extensions: 243289
Number of successful extensions: 768
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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