Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30163
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    25   0.30 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.92 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.6  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 279 KGTFPSTTSKNLCF*NYVFGIEFCGKLNCLILGF--GHIKFGYRNSMVP 139
           +G   +T   N+C+   +F  +  G  NCL+L     +I  G   S+ P
Sbjct: 26  EGVLDATKPGNVCYQRDLFRQKITGSENCLVLNVYTRNIPDGIHTSLYP 74


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 378 LFCY*ELFKHLSCYITSNFRCVDHSNS 298
           LF Y   +  ++CY+T  +  +DH+ S
Sbjct: 135 LFLYIFTYLSVTCYVTYAWSPIDHTES 161


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 326 TSGVLTIRTPPLSPFLKVPFPRP 258
           T+G + +  PP+ PF    +P P
Sbjct: 153 TAGSMGLTRPPMYPFPAGQYPYP 175


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 326 TSGVLTIRTPPLSPFLKVPFPRP 258
           T+G + +  PP+ PF    +P P
Sbjct: 45  TAGSMGLTRPPMYPFPAGQYPYP 67


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 290 SPFLKVPFPRP 258
           +PFLK P+P P
Sbjct: 304 TPFLKRPYPVP 314


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 87 FTWKFVG*RCCQYLI 43
          +TWK    +C +YL+
Sbjct: 44 YTWKCENQKCVKYLV 58


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -2

Query: 356 LSIFPAISPATSGVLTIRTPPLSPFLKVPFPRPPARTC 243
           L +FPA+  +    + +RT      L +P    P R C
Sbjct: 214 LFVFPALIISACYAVIVRTIWSKSKLLIPVGHIPIRQC 251


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -2

Query: 281 LKVPFPRPPARTCAFRTMSLVLSSVANLIASSLVLATLNLG 159
           L  P+P   A+    R   + +S V+N   +  +    N+G
Sbjct: 253 LSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIG 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,929
Number of Sequences: 336
Number of extensions: 2943
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)