Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30163
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0655 + 24761323-24761424,24761565-24761675,24762361-247624... 123 1e-28
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415... 31 0.73
10_08_0631 - 19435796-19436452,19437237-19438130 30 1.3
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 30 1.3
12_02_0299 - 17051570-17052474,17053542-17053755 29 1.7
09_02_0070 - 3844270-3846228 29 2.2
07_03_0967 - 23023019-23023158,23023676-23023767,23024474-230247... 29 2.2
04_03_0686 + 18701543-18701917,18702658-18702702,18703175-187032... 29 2.2
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 29 2.2
06_03_0429 - 20701107-20701534,20701628-20701847 29 2.9
10_01_0150 + 1747424-1747758,1748097-1748103 28 5.1
04_04_1442 + 33628102-33628246,33628352-33628494,33628618-336288... 27 6.8
11_01_0198 - 1556215-1556298,1556412-1556580,1556666-1556921,155... 27 8.9
07_03_1216 + 24940426-24940714,24940800-24940877,24941954-249421... 27 8.9
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 27 8.9
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 27 8.9
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575... 27 8.9
01_04_0106 + 16068729-16070651 27 8.9
>02_04_0655 +
24761323-24761424,24761565-24761675,24762361-24762472,
24763049-24763113,24763727-24763804,24764550-24764624,
24764747-24764899,24764988-24765122,24765325-24765495
Length = 333
Score = 123 bits (296), Expect = 1e-28
Identities = 67/144 (46%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Frame = +1
Query: 88 QQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL--NTKDIVLKAQVLAGG 261
QQ+R LN+HEY L+ +GI VP+ A + +E + + K+IV+K+Q+LAGG
Sbjct: 23 QQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGG 82
Query: 262 RGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRR 441
RG GTFK+GL+GGV +V E A +A KML Q+LVTKQTG G+I + V + E+
Sbjct: 83 RGLGTFKSGLQGGVHIVKAEE-AESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN 141
Query: 442 EYYVAIMMERSXNGPVIIASSQGG 513
E Y AI ++R+ GP+IIA S+GG
Sbjct: 142 EMYFAITLDRNTAGPLIIACSKGG 165
>05_01_0498 +
4152729-4152820,4153316-4153425,4153840-4153877,
4154335-4154433,4154461-4157475
Length = 1117
Score = 30.7 bits (66), Expect = 0.73
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -2
Query: 269 FPRPPARTCAFRTMSLVLSSVANLIASSLVLATLNLGTGI 150
F P + A +SLVL+ LI+SS+VLA L L GI
Sbjct: 110 FQHPNTASVAQLMVSLVLAMAGKLISSSIVLALLPLFCGI 149
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 299 PPLSPFLKVPFPRPPARTCAFRTMSLVLSSVANLIASSL-VLATLN 165
PP P L +P P PP R C T L L SV L+A++L VL L+
Sbjct: 10 PPPPPPLPLPLPLPP-RNCPLATAVLALLSV--LLATALWVLLVLS 52
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 332 PATSGVLTIRTPPLSPFLKVPFPRPPARTCAFRTMSLVLSSVANLIASS 186
PA V R PP P + V P PPA T A T + + N +A++
Sbjct: 84 PAAPAVTPARPPPQQPAVAVAAP-PPATTMATATEEVAAPATGNPMANA 131
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 392 PAAPVCFVT-RSCLSIFPAISPATSGVLTIRTPPLSPFLKVPFPRPPA 252
P P+ F T R P ++P L PP+ PFL P P PPA
Sbjct: 213 PWPPIPFCTPRPWFPPIPFLTPPPPPFLPFPLPPI-PFLTPPSPPPPA 259
>09_02_0070 - 3844270-3846228
Length = 652
Score = 29.1 bits (62), Expect = 2.2
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 398 IRPAAPVCFVTRS-CLSIFPAISPATSGVLTIRTPPLSPFLKVPFPRPPARTCAFRTMSL 222
I A+PV F S L + A+ +++ PP S P P P R +F T +
Sbjct: 26 IATASPVAFSFPSFSLRNLTLLGGASLRAISVSLPPPSSRALFPLPLPFPRNASFSTSFV 85
Query: 221 VLSSVANLIASSL 183
S A ASSL
Sbjct: 86 FASPAAARPASSL 98
>07_03_0967 -
23023019-23023158,23023676-23023767,23024474-23024720,
23024822-23025134
Length = 263
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 296 PLSPFLKVPFPRPPARTCAFRTMSLVLSSVANLIASSLVLATLNLG 159
P + F ++P PRPP+R AF ++ A A+SL L + G
Sbjct: 7 PAATFPRLPPPRPPSRP-AFAAALAAAAAAAAAAAASLTLTAKSAG 51
>04_03_0686 +
18701543-18701917,18702658-18702702,18703175-18703289,
18703644-18703713,18703796-18703844,18704319-18704416,
18704984-18705122,18705261-18705410
Length = 346
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 335 SPATSGVLTIRTPPLSPFLKVPFPRPPARTCAFRTMSL 222
+PA S LT+ P SP +++ RPPART R + L
Sbjct: 5 TPAASATLTLLLPA-SPPMRLRARRPPARTSRSRPLLL 41
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = +1
Query: 319 PEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSXNGPVIIA 498
PE++ D K L++L +Q G+ + ++ +++++FP ++ + S + +
Sbjct: 517 PEISADQREKYLQRLQQVQQQGSLLNVSHITGISQKQFPSQQPNPLLQQFNSQSSSI--- 573
Query: 499 SSQGGV 516
SSQ G+
Sbjct: 574 SSQAGI 579
>06_03_0429 - 20701107-20701534,20701628-20701847
Length = 215
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 344 PAISPATS--GVLTIRTPPLSPFLKVPFPRPPARTCAFRTMSLVLSSVANLIASSLVLAT 171
PA SP +T TPP P P P P T S SS A A +L+LA
Sbjct: 145 PAASPIAKPPAAVTAATPPPPPPPPSPSPSPSPAPQEAATASAATSSSAATAAHALLLAA 204
Query: 170 L 168
+
Sbjct: 205 M 205
>10_01_0150 + 1747424-1747758,1748097-1748103
Length = 113
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 329 ATSGVLTIRTPPLSPFLKVPFPRPPARTC 243
+T+G + PP SP L R P RTC
Sbjct: 66 STAGAGAVACPPTSPRLTAASARAPPRTC 94
>04_04_1442 +
33628102-33628246,33628352-33628494,33628618-33628831,
33628925-33629159,33629285-33629372,33629526-33629885
Length = 394
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 380 VCFVTRSCLSIFPAISPATSGVLTIRTPPLSPFLKVPFPRPPA 252
VC + C+ FP + PA S V+ + T + +P P PA
Sbjct: 306 VCQIALLCVQPFPNLRPAMSEVVLMLTMKTTEQSVIPAPVRPA 348
>11_01_0198 -
1556215-1556298,1556412-1556580,1556666-1556921,
1557000-1557114,1557191-1557441,1557565-1557892,
1558197-1558358,1558846-1558985,1559325-1559436,
1560028-1560200,1560411-1560506,1560687-1560930
Length = 709
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 106 NVHEYISYTLLRDHGIPVPKFNVAKTK---DEAIKFATELNTKDIVLKAQVLAGG 261
NVH I++T HG+P P+ + ++ DE + + T + VLK ++ G
Sbjct: 127 NVHAGIAHTRWATHGVPAPRNSHPQSSGAGDEFLVVHNGIITNNEVLKETLIRHG 181
>07_03_1216 +
24940426-24940714,24940800-24940877,24941954-24942129,
24942298-24942492
Length = 245
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 314 LTIRTPPLSPFL---KVPFPRPPARTCAFRTMSLVLSSVANLIASSLVL 177
L++R+PP +PFL + P P R AF + + + +A + VL
Sbjct: 20 LSLRSPPKTPFLPTSPIRVPTPRRRPAAFSSAAAAVVPIAASLLEGPVL 68
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 344 PAISPATSGVLTIRTPPLSPFLKVPFPRPP 255
P +SP ++ V + PP P +P P PP
Sbjct: 105 PGVSPTSAAVDAMMMPPPPPIDTLPPPPPP 134
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 341 AISPATSGVLTIRTPPLSPFLKVPFPR 261
+++ S LTIR+ P++P P PR
Sbjct: 196 SVTEEASDALTIRSDPITPITNPPLPR 222
>03_02_0124 -
5749183-5749773,5750628-5751160,5751191-5753035,
5753632-5753820,5753911-5754013,5754087-5754269,
5754392-5754484,5755031-5755219,5756133-5756327
Length = 1306
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 387 SRTNLQHGHGHREEVPTQGILRGNH 461
+ T ++HG G+R + PT G++ +H
Sbjct: 354 TNTWIRHGSGNRPDAPTLGLVHQHH 378
>01_04_0106 + 16068729-16070651
Length = 640
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -2
Query: 344 PAISPATSGVLTIRTPPLSPFLKVPFPRPPARTCAFRTMSLVLSSVANLIAS-SLVL 177
PA +PA + L PFL P P + C S+ L +L A+ S VL
Sbjct: 26 PAAAPAPQQQCPLNFTALRPFLAQPLPPDDSARCLLAVQSVRLLLALHLAATGSFVL 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,030,029
Number of Sequences: 37544
Number of extensions: 334490
Number of successful extensions: 1241
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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