Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30162
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 33 0.18
12_01_0871 + 8300504-8300845 32 0.31
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 31 0.73
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 30 0.96
06_01_0977 + 7585817-7585970,7586057-7586146,7586500-7586702,758... 30 1.3
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 30 1.3
09_03_0088 - 12242020-12242941,12243467-12243550,12243591-12244438 29 1.7
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 29 1.7
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 1.7
03_05_0514 - 25082662-25082669,25082978-25083043,25083903-250840... 29 1.7
02_05_1180 + 34776151-34776480,34776578-34776760,34776849-347771... 29 1.7
08_01_0899 - 8862275-8862972,8863252-8863332,8863594-8863819 29 2.2
12_02_1137 - 26392399-26392613,26392828-26393233 29 2.9
09_02_0082 - 4060018-4061604 29 2.9
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 2.9
10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878 28 3.9
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 3.9
04_04_0493 - 25615507-25615524,25615564-25615816,25616127-256162... 28 3.9
04_03_0287 + 13947705-13947974 28 3.9
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 28 3.9
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 28 5.1
02_01_0703 + 5251901-5251950,5252783-5253554 28 5.1
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 27 8.9
06_03_0854 + 25400855-25403741,25406174-25407708 27 8.9
05_02_0147 + 7082180-7082223,7082459-7082872,7083061-7083151,708... 27 8.9
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 27 8.9
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 27 8.9
01_01_0715 - 5542648-5543219,5543352-5543544 27 8.9
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 83 AAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVA 208
AAQ+ + L GNPPA ++A+G FS P+ + +VA
Sbjct: 25 AAQKASTWKTLSGNPPA--IIAKGGFSGLFPDSSDFAYGFVA 64
>12_01_0871 + 8300504-8300845
Length = 113
Score = 31.9 bits (69), Expect = 0.31
Identities = 24/65 (36%), Positives = 28/65 (43%)
Frame = -1
Query: 309 GMFLAM*ARARAICSGTGGEVGIALPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTA 130
G LA+ IC+G GGE G A W P+SSA + G V P G
Sbjct: 8 GCGLALHGPVSLICTGVGGERGEAATGVWEPWSSA--VRERGRALRAVSRLRP--LVGDQ 63
Query: 129 GGFPP 115
GG PP
Sbjct: 64 GGAPP 68
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 189 SASITSPTRTDTSPLVMLSPLPHQCLSR-SLVLLPTSP 299
S+S P T T+PL + +P PH C+SR L+PT P
Sbjct: 411 SSSSAMPHAT-TAPLALRAPAPHLCVSRMPPPLVPTPP 447
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 30.3 bits (65), Expect = 0.96
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = +3
Query: 126 PLLFPSLHRAHSPGHLLKVFP-SASITSPTRTDTSPLVMLS-------PLPHQCLSRSLV 281
PLL PS R H G + P + + + R D PL+ L P PH S+
Sbjct: 16 PLLHPSRRRRHRQGGCIHTSPGTRPLVARARFDPPPLLRLKVSDSSDCPAPHHPHSQHQP 75
Query: 282 LLPT 293
LLPT
Sbjct: 76 LLPT 79
>06_01_0977 +
7585817-7585970,7586057-7586146,7586500-7586702,
7587274-7587452,7587913-7587991,7588403-7588537,
7588651-7588800,7588887-7588997,7589084-7590004,
7590351-7590623,7590853-7591062,7591425-7591573,
7591716-7592052
Length = 996
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 189 SASITSPTRTDTSPLVMLSPLPHQCLSRSLVLLPTSPR 302
+A++ SPT T SPL +LS P R VLLP S R
Sbjct: 3 AAALLSPTATSRSPLPLLSTAP--AAHRLHVLLPLSGR 38
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 138 PSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQCLSRS-LVLLPTSP 299
P R HSP L + PS+S ++ TS + P P + + + V LP+ P
Sbjct: 30 PRSRRRHSPSPSLALTPSSSASASASASTSSRPKVRPSPRRAYAAAQWVALPSHP 84
>09_03_0088 - 12242020-12242941,12243467-12243550,12243591-12244438
Length = 617
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 207 PTRTDTSPLVMLSPLPHQCLSRSLVLLPTS 296
P TDTS ++PLPH + R LV+ TS
Sbjct: 457 PVDTDTSSATTVTPLPHMYVVRDLVVDLTS 486
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 388 CFHLFLFIRCKP-NPKYVCEIYRLLLERNVLGDVGKSTSDLL 266
CF LF+F P +P+Y+C + R + R +L + + + L
Sbjct: 213 CFILFIFFPVTPESPRYLCSVGRTMDARVILEKIARMNNSSL 254
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT +A PTSP
Sbjct: 1751 SYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSP 1785
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y + Y PT A PTSP
Sbjct: 1758 SYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSP 1792
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +3
Query: 138 PSLHRAHSPGHLLKVFP------SASITSPTRTDTSPLVMLSPLPHQCLSRSLVL-LPTS 296
PSLH+ GH +K+ P + S+TSP D M +P +R+ VL L
Sbjct: 499 PSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMV 558
Query: 297 PRTFLS 314
P+ +S
Sbjct: 559 PKCIVS 564
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 122 NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
+P P ++S TSP P S +Y Y PT + PTSP
Sbjct: 1726 SPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1771
>03_05_0514 -
25082662-25082669,25082978-25083043,25083903-25084017,
25084769-25084843,25085285-25085338,25085420-25085471,
25087308-25087447,25087993-25088077,25088358-25088431,
25088533-25088616,25088617-25088653,25089569-25089872,
25090371-25090536,25091053-25091076
Length = 427
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 307 NVLGDVGKSTSDLLRHWWGSGDSITSGLVSV 215
NV+ + G ST L WWGS ITSG++ +
Sbjct: 4 NVITEAGISTR--LNQWWGSIPFITSGVILI 32
>02_05_1180 +
34776151-34776480,34776578-34776760,34776849-34777198,
34777430-34777631
Length = 354
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 144 LHRAHSPGHLLKVFPSASITSPTRTDTSPLV 236
LHRAH L ++FP +TS + D +P+V
Sbjct: 267 LHRAHLLQMLKELFPQYPVTSKCKDDGNPMV 297
>08_01_0899 - 8862275-8862972,8863252-8863332,8863594-8863819
Length = 334
Score = 29.1 bits (62), Expect = 2.2
Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Frame = +2
Query: 23 GNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNY 202
GN+ P+ Y NN + QGVP N G P P + +F + G
Sbjct: 51 GND-RPETREEAMYMGNNNNGYRPQGVPANESGRIPGQPDSSIENFKAITTRGGHTQKQE 109
Query: 203 VADENGYQPTGNAI--PTSPPVPEQIARA 283
A NG + P +P P + R+
Sbjct: 110 TAPNNGGGQADGTLQQPDTPQAPGEEERS 138
>12_02_1137 - 26392399-26392613,26392828-26393233
Length = 206
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 285 RARAICSGTGGEVGIALPVGWYPFSSAT*LTLMG--TPSGDVQENEPCA 145
R R C G VG+ + G P ++AT + L G G +E+ CA
Sbjct: 140 RRRRSCVGEAAPVGVGILTGGKPTTAATAVALTGEVLRGGGARESSSCA 188
>09_02_0082 - 4060018-4061604
Length = 528
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 183 FPSASITSPT-RTDTSPLVMLSPLPHQCLSRSLVLLPTSP 299
+ AS +S T R +PL + +P PH C+ R VL P +P
Sbjct: 138 YGGASSSSATPRAPIAPLALRAPAPHLCVPR--VLSPPAP 175
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 189 SASITSPTRTDTSPLVMLSPLPHQCLS---RSLVLLPTSP 299
++S ++ T+PL + +P PH +S RSLVL P +P
Sbjct: 301 ASSSSAMPHAATAPLALRTPAPHLRVSRKPRSLVLTPPAP 340
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 116 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 259
GG+ A P G+ ++ S VP +Y Y P+ A P +PP
Sbjct: 315 GGDYAAPPSSYGGNNAYNSDSAVPPPSSYGGGPGSYPPSYGAPPPNPP 362
>10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878
Length = 947
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 59 FYETNNGIAAQEQG--VPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPT 232
F+E++ AA+ G GG AV V G+ WT G +E + PT
Sbjct: 681 FFESHRVFAARNVGGNYGHAAGGGDDAVDVTGVGADGWTQGGGGGGGAAARPEEPAWSPT 740
Query: 233 GNAIPTS 253
++ P+S
Sbjct: 741 PSSSPSS 747
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT A PTSP
Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1723
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S Y GY PT + PTSP
Sbjct: 1703 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1737
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +3
Query: 138 PSLHRAHSPGHLLKVFP------SASITSPTRTDTSPLVMLSPLPHQCLSRSLVL-LPTS 296
PSLH+ GH +K+ P + S+TSP D M +P +R+ VL L
Sbjct: 461 PSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMV 520
Query: 297 PRTFLS 314
P+ +S
Sbjct: 521 PKCIVS 526
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 104 PRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
P G+P P S+S TSP P S +Y Y PT + PTSP
Sbjct: 1583 PSYTPGSPTYSPT--SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 128 PAVPVVAQGS--FSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
P P GS +S TSP P S +Y Y PT + PTSP
Sbjct: 1580 PTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 146 AQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
A S+S TSP P S Y Y PT + PTSP
Sbjct: 1574 ASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSP 1611
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1605 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT A PTSP
Sbjct: 1626 SYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSP 1660
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1668 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
>04_04_0493 -
25615507-25615524,25615564-25615816,25616127-25616242,
25616410-25616662,25616736-25616823,25616920-25616994,
25617065-25617140,25617528-25617791
Length = 380
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = -1
Query: 258 GGEVGIALPVGWY-PFSSAT 202
GG++GIAL + WY PF + T
Sbjct: 256 GGQIGIALSITWYEPFRNTT 275
>04_03_0287 + 13947705-13947974
Length = 89
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 96 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASI-TSPT 212
R+ H+T TP PSL R HL F SAS+ +PT
Sbjct: 9 RDAHLTRQPTPSTDPSLMRRTHSSHLSSSFRSASLPQNPT 48
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 406 Y*QRQYCFHLFLFIRCKPNPKYVCEIYRLLLERNVLGDVGKSTSDLLRHWWG 251
Y Q H FL RC+ P Y E+ ++++ +G + +LRH G
Sbjct: 66 YCQEPVVTHDFLNTRCRRRPNY-GEVEEMIMKAAKMGQMSSQIGVVLRHQHG 116
>09_06_0061 +
20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 62 YETNNGIAAQEQGVPRN--LGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTG 235
Y N +A+ E + L GNPP + V + + + +P + S N E T
Sbjct: 185 YRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKEKLPMNTP 244
Query: 236 NAIPTSPPVPEQI 274
A P+ P + +I
Sbjct: 245 LAAPSLPALNIEI 257
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 203 VADENGYQPTGNAIPTSPPVP 265
+A G P GNA+P PP P
Sbjct: 51 IAPPPGRMPMGNAVPDGPPTP 71
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 206 ADENGYQPTGNAIPTSPPVPEQIARALAYIAKNI 307
A + G + TG++ PT PP P IA + +N+
Sbjct: 528 AADGGVRTTGSSNPTPPPSPPFIATPSPELIQNV 561
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.1 bits (57), Expect = 8.9
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 108 VTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVLL 287
VT+V PL P+ H+P V P+A I+ P+ + +P P +L
Sbjct: 1012 VTVVAPPLPVPT-PAVHAPAP--PVEPNAVISPPSSALAPAYAVPAPAPSLAALEALAPP 1068
Query: 288 PTSPRTFLSRSKR 326
P +P T LS S R
Sbjct: 1069 PATPAT-LSASSR 1080
>05_02_0147 +
7082180-7082223,7082459-7082872,7083061-7083151,
7084230-7084487
Length = 268
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 171 LLKVFPSASITSPTRTDTSPLVMLSPLPH--QCLSRSLVLLPTSPRTFLS 314
L++ S PT +TS L ++S LP + LSR++ + PR++LS
Sbjct: 124 LIRSLGCPSTPKPTYFETSSLQLISLLPFCSKFLSRNVGIAEVIPRSWLS 173
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 206 ADENGYQPTGNAIPTSPPVPEQIARALAYIAKNI 307
A + G + TG++ PT PP P IA + +N+
Sbjct: 409 AADGGVRTTGSSNPTPPPSPPFIATPSPELIQNV 442
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 206 ADENGYQPTGNAIPTSPPVPEQIARALAYIAKNI 307
A + G + TG++ PT PP P IA + +N+
Sbjct: 516 AADGGVRTTGSSNPTPPPSPPFIATPSPELIQNV 549
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 104 PRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 265
P G PP P A G+F+ SP G +N+ A G G A P PP P
Sbjct: 182 PAPAGSPPPPPPPPAGGNFTAPSPAG---GMNFTAPAPG--TNGTAAP--PPRP 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,830,920
Number of Sequences: 37544
Number of extensions: 356258
Number of successful extensions: 1273
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -