BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30162 (516 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 31 0.43 SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 31 0.74 SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74 SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 31 0.74 SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 31 0.74 SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74 SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 31 0.74 SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) 31 0.74 SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98 SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) 30 1.3 SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7 SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 29 2.3 SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35) 29 2.3 SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 29 3.0 SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0 SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 5.3 SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) 28 5.3 SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9 SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9 SB_30016| Best HMM Match : Strabismus (HMM E-Value=0) 27 9.2 SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 27 9.2 >SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) Length = 1012 Score = 31.5 bits (68), Expect = 0.43 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581 Query: 218 GYQ-PTGNAIPT 250 GYQ PT N +PT Sbjct: 582 GYQKPTTNQLPT 593 >SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) Length = 264 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 625 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) Length = 239 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) Length = 346 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 249 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 308 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 309 GYQQPTTNQLPT 320 >SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1317 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 546 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 605 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 606 GYQQPTTNQLPT 617 >SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) Length = 239 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) Length = 335 Score = 30.7 bits (66), Expect = 0.74 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 232 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 291 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 292 GYQQPTTNQLPT 303 >SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3176 Score = 30.3 bits (65), Expect = 0.98 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 153 AHSPGHLLKVFPSASITSPTRTDTSPLV-MLSPLPHQCLSRSLVLLPTSPRT 305 A+ P H V SA+ SP+ TDTS +V +S PH ++ + +P T Sbjct: 2226 ANIPLHSSSVTSSAAFCSPSNTDTSRVVGRVSQAPHNSITSRINESEVAPST 2277 >SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) Length = 336 Score = 29.9 bits (64), Expect = 1.3 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 271 SF+ S EG P + E+ Q G+ IPTSPPV E+ Sbjct: 67 SFASVSEEGSPAKKIHFERED--QDPGDQIPTSPPVAER 103 >SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1047 Score = 29.5 bits (63), Expect = 1.7 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = +2 Query: 38 PDGSYTYFYETNNGIAAQEQGVPRNLGGN--PPAVPVVAQGSFSWTSPEGVPISVNYVAD 211 P G Y + + G+ Q+ P ++ N PP +P+ A + P +P + Sbjct: 671 PQGIPYYGPQASGGVIFQQGPYPSHMPANAPPPNIPIQANFPRNIPPPNYIPPTQQMSFQ 730 Query: 212 ENGY-QPTGNAIPTSPPVPE 268 + Y +P N IPT V E Sbjct: 731 HSPYNRPPPNVIPTGNMVIE 750 >SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) Length = 781 Score = 29.1 bits (62), Expect = 2.3 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 497 TLFTLASKLHTTSITAI*RLKRIYITISMELLTAPVLFS 381 TL+ ASK HT + R RI + S+ +L+A V+F+ Sbjct: 734 TLYVFASKDHTEICLRLTRYSRIVVMYSLLVLSAYVMFT 772 >SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35) Length = 572 Score = 29.1 bits (62), Expect = 2.3 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 183 FPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVLLPTSP 299 +P + ITS +D S + S LP C + + PT+P Sbjct: 166 YPRSDITSMANSDVSSGAIYSSLPSVCPPKGTHMTPTAP 204 >SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) Length = 836 Score = 28.7 bits (61), Expect = 3.0 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 41 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 229 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTYNPMFRPFPDNPQ 288 Query: 218 GY-QPTGNAIPT 250 GY QPT N +PT Sbjct: 289 GYQQPTTNQLPT 300 >SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 99 Score = 28.3 bits (60), Expect = 4.0 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +3 Query: 135 FPSLHRAHSPGHLLKVFPSASITSPT--RTDTSPLVMLSPLPHQCLSR 272 F L +AH+P H+L VFP+ T + + P V++ +C +R Sbjct: 3 FLYLSQAHTPPHILLVFPAKKCNRGTLSKNWSGPTVLIELAKGKCQTR 50 >SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 157 Score = 27.9 bits (59), Expect = 5.3 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +2 Query: 119 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 259 GNPP PV +F + P + Y A + P G ++P PP Sbjct: 105 GNPPYPPVDQYSAFPY--PPQDQQAPPYPAQNQYWNPQGTSLPPPPP 149 >SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) Length = 1467 Score = 27.9 bits (59), Expect = 5.3 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +2 Query: 119 GNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 G PA P + S+S TSP P S +Y Y PT + PTSP Sbjct: 448 GYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 496 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 469 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 503 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 476 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 510 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 483 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 517 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 490 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 524 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 497 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 531 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 504 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 538 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 511 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 545 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 518 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 552 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 525 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 559 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 532 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 566 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 539 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 573 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 S+S TSP P S +Y Y PT + PTSP Sbjct: 546 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 580 >SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 886 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 212 ENGYQPTGNAIPTSPPVPEQ 271 EN YQP P SPP P+Q Sbjct: 117 ENSYQPVELFAPNSPPKPQQ 136 >SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) Length = 644 Score = 27.9 bits (59), Expect = 5.3 Identities = 12/36 (33%), Positives = 16/36 (44%) Frame = +2 Query: 116 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 223 G P +PV + + W G PIS+N N Y Sbjct: 146 GSLPDYIPVYSPETIVWGQSSGAPISINSSVIVNAY 181 >SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 964 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +2 Query: 134 VPVVAQGSFSWTSPEGVPISVNYVADENGY 223 +PV + G+ W G PIS+N N Y Sbjct: 171 IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200 >SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 352 Score = 27.5 bits (58), Expect = 6.9 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = -1 Query: 288 ARARAICSGTGGEVGIA----LPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGF 121 ARAR C +G+A +G Y TP+ + + +P AT GT Sbjct: 109 ARARRRCRARRSVIGVAGLLVSLIGLYTRRRELAAAFTRTPAVNQRATDPLATGGTDDVT 168 Query: 120 PPRLR 106 PP LR Sbjct: 169 PPTLR 173 >SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 754 Score = 27.5 bits (58), Expect = 6.9 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -1 Query: 255 GEVGIALPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGFPPRLR 106 G G+ + +G Y TP+ + +P AT GT PP LR Sbjct: 600 GVAGLLVLIGLYTRRRELAAAFTRTPAAKQRATDPLATEGTDDVTPPTLR 649 >SB_30016| Best HMM Match : Strabismus (HMM E-Value=0) Length = 543 Score = 27.1 bits (57), Expect = 9.2 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = +1 Query: 118 WKPPCCSRRCTGLIL 162 WKPP C C GL L Sbjct: 115 WKPPMCGIECDGLFL 129 >SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) Length = 1052 Score = 27.1 bits (57), Expect = 9.2 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +2 Query: 146 AQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256 A S+S TSP P S +Y + Y P + PTSP Sbjct: 685 ASPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSP 722 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,658,942 Number of Sequences: 59808 Number of extensions: 383456 Number of successful extensions: 1185 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1013 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1157 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1148326654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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