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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30162
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)         31   0.43 
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)              31   0.74 
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.74 
SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)            31   0.74 
SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)             31   0.74 
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.74 
SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)            31   0.74 
SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4)                   31   0.74 
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.98 
SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3)                 30   1.3  
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.7  
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)             29   2.3  
SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35)                29   2.3  
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)              29   3.0  
SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.0  
SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)               28   5.3  
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1)                      28   5.3  
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.3  
SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.9  
SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_30016| Best HMM Match : Strabismus (HMM E-Value=0)                  27   9.2  
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)         27   9.2  

>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
          Length = 1012

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581

Query: 218 GYQ-PTGNAIPT 250
           GYQ PT N +PT
Sbjct: 582 GYQKPTTNQLPT 593


>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
          Length = 264

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207


>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 625

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207


>SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
          Length = 239

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207


>SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
          Length = 346

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 249 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 308

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 309 GYQQPTTNQLPT 320


>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1317

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 546 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 605

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 606 GYQQPTTNQLPT 617


>SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
          Length = 239

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207


>SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4)
          Length = 335

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 232 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 291

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 292 GYQQPTTNQLPT 303


>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3176

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 153  AHSPGHLLKVFPSASITSPTRTDTSPLV-MLSPLPHQCLSRSLVLLPTSPRT 305
            A+ P H   V  SA+  SP+ TDTS +V  +S  PH  ++  +     +P T
Sbjct: 2226 ANIPLHSSSVTSSAAFCSPSNTDTSRVVGRVSQAPHNSITSRINESEVAPST 2277


>SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3)
          Length = 336

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 271
           SF+  S EG P    +   E+  Q  G+ IPTSPPV E+
Sbjct: 67  SFASVSEEGSPAKKIHFERED--QDPGDQIPTSPPVAER 103


>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1047

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
 Frame = +2

Query: 38  PDGSYTYFYETNNGIAAQEQGVPRNLGGN--PPAVPVVAQGSFSWTSPEGVPISVNYVAD 211
           P G   Y  + + G+  Q+   P ++  N  PP +P+ A    +   P  +P +      
Sbjct: 671 PQGIPYYGPQASGGVIFQQGPYPSHMPANAPPPNIPIQANFPRNIPPPNYIPPTQQMSFQ 730

Query: 212 ENGY-QPTGNAIPTSPPVPE 268
            + Y +P  N IPT   V E
Sbjct: 731 HSPYNRPPPNVIPTGNMVIE 750


>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
          Length = 781

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 497 TLFTLASKLHTTSITAI*RLKRIYITISMELLTAPVLFS 381
           TL+  ASK HT     + R  RI +  S+ +L+A V+F+
Sbjct: 734 TLYVFASKDHTEICLRLTRYSRIVVMYSLLVLSAYVMFT 772


>SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35)
          Length = 572

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 183 FPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVLLPTSP 299
           +P + ITS   +D S   + S LP  C  +   + PT+P
Sbjct: 166 YPRSDITSMANSDVSSGAIYSSLPSVCPPKGTHMTPTAP 204


>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
          Length = 836

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41  DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 217
           D + T  +  NN    + QG P    G P A      G+  ++  P   P+   +  +  
Sbjct: 229 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTYNPMFRPFPDNPQ 288

Query: 218 GY-QPTGNAIPT 250
           GY QPT N +PT
Sbjct: 289 GYQQPTTNQLPT 300


>SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 135 FPSLHRAHSPGHLLKVFPSASITSPT--RTDTSPLVMLSPLPHQCLSR 272
           F  L +AH+P H+L VFP+      T  +  + P V++     +C +R
Sbjct: 3   FLYLSQAHTPPHILLVFPAKKCNRGTLSKNWSGPTVLIELAKGKCQTR 50


>SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 119 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 259
           GNPP  PV    +F +  P     +  Y A    + P G ++P  PP
Sbjct: 105 GNPPYPPVDQYSAFPY--PPQDQQAPPYPAQNQYWNPQGTSLPPPPP 149


>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
          Length = 1467

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 119 GNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           G  PA P  +    S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 448 GYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 496



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 469 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 503



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 476 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 510



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 483 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 517



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 490 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 524



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 497 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 531



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 504 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 538



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 511 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 545



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 518 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 552



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 525 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 559



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 532 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 566



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 539 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 573



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 155 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           S+S TSP   P S +Y      Y PT  +  PTSP
Sbjct: 546 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 580


>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 886

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 212 ENGYQPTGNAIPTSPPVPEQ 271
           EN YQP     P SPP P+Q
Sbjct: 117 ENSYQPVELFAPNSPPKPQQ 136


>SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1)
          Length = 644

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 116 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 223
           G  P  +PV +  +  W    G PIS+N     N Y
Sbjct: 146 GSLPDYIPVYSPETIVWGQSSGAPISINSSVIVNAY 181


>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 964

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 134 VPVVAQGSFSWTSPEGVPISVNYVADENGY 223
           +PV + G+  W    G PIS+N     N Y
Sbjct: 171 IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200


>SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 352

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = -1

Query: 288 ARARAICSGTGGEVGIA----LPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGF 121
           ARAR  C      +G+A      +G Y            TP+ + +  +P AT GT    
Sbjct: 109 ARARRRCRARRSVIGVAGLLVSLIGLYTRRRELAAAFTRTPAVNQRATDPLATGGTDDVT 168

Query: 120 PPRLR 106
           PP LR
Sbjct: 169 PPTLR 173


>SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 754

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -1

Query: 255 GEVGIALPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGFPPRLR 106
           G  G+ + +G Y            TP+   +  +P AT GT    PP LR
Sbjct: 600 GVAGLLVLIGLYTRRRELAAAFTRTPAAKQRATDPLATEGTDDVTPPTLR 649


>SB_30016| Best HMM Match : Strabismus (HMM E-Value=0)
          Length = 543

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 WKPPCCSRRCTGLIL 162
           WKPP C   C GL L
Sbjct: 115 WKPPMCGIECDGLFL 129


>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
          Length = 1052

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 146 AQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 256
           A  S+S TSP   P S +Y +    Y P   +  PTSP
Sbjct: 685 ASPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSP 722


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,658,942
Number of Sequences: 59808
Number of extensions: 383456
Number of successful extensions: 1185
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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