Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30157
         (370 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P53900 Cluster: Prefoldin subunit 4; n=4; Saccharomycet...    32   2.9  
UniRef50_Q9XMU8 Cluster: Orf421; n=4; Tetrahymena|Rep: Orf421 - ...    32   3.8  
UniRef50_Q8IEI2 Cluster: Putative uncharacterized protein MAL13P...    32   3.8  
UniRef50_O96157 Cluster: Putative uncharacterized protein PFB028...    32   3.8  
UniRef50_A0DP47 Cluster: Chromosome undetermined scaffold_59, wh...    32   3.8  
UniRef50_Q7RSZ4 Cluster: ABC transporter-like protein; n=10; Pla...    31   5.1  
UniRef50_Q4JCD1 Cluster: Conserved protein; n=1; Sulfolobus acid...    31   6.7  
UniRef50_Q8WTL6 Cluster: Putative uncharacterized protein; n=2; ...    31   8.9  
UniRef50_Q4YMR4 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  

>UniRef50_P53900 Cluster: Prefoldin subunit 4; n=4;
           Saccharomycetaceae|Rep: Prefoldin subunit 4 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 129

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 15/57 (26%), Positives = 34/57 (59%)
 Frame = +3

Query: 36  NLRIKYLKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDDIIMY 206
           N ++ +  ++ I ++SK++   D I + + L    +E +++VSL+I + D D+ + Y
Sbjct: 11  NTQVTFEDQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDEDEPVQY 67


>UniRef50_Q9XMU8 Cluster: Orf421; n=4; Tetrahymena|Rep: Orf421 -
           Tetrahymena pyriformis
          Length = 421

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 97  IYKIFEYLQIVFFFKYFIRKLKIDIIK*SCRY 2
           I+KIF+Y++  +FFK  +RK K    +   RY
Sbjct: 50  IFKIFKYIKFTYFFKKILRKKKFKKFENPIRY 81


>UniRef50_Q8IEI2 Cluster: Putative uncharacterized protein
           MAL13P1.66; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL13P1.66 - Plasmodium
           falciparum (isolate 3D7)
          Length = 2900

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 14/46 (30%), Positives = 29/46 (63%)
 Frame = +3

Query: 87  ILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDDIIMYIGLRNF 224
           ILY +  I + V +I ++  ++NN+++ + +++  DII YI   +F
Sbjct: 593 ILYKAFHIDKIVQIIIHLDNDVNNINILLNLANYTDIIHYINYISF 638


>UniRef50_O96157 Cluster: Putative uncharacterized protein PFB0280w;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFB0280w - Plasmodium falciparum (isolate 3D7)
          Length = 2539

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 27   SIFNLRIKYLKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDDIIMY 206
            SI N R+KY     + K +  +Y  D   R +Y  + I EN  N+S  I+  +  ++ + 
Sbjct: 1783 SILNNRMKYNNIIDMYKRNNFIYKDDNYKR-IYTYDEILENDINISYLIKQINILNVTII 1841

Query: 207  IGLRN 221
             G+RN
Sbjct: 1842 CGMRN 1846


>UniRef50_A0DP47 Cluster: Chromosome undetermined scaffold_59, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_59, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1167

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 12   DYLIMSIFNLRIKYLKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDND 191
            D LI +  N  +K+L+   IC+Y +  Y+   +   +YLI + +E    V     + D+ 
Sbjct: 918  DSLISTEQNFALKFLEFSKICEYKESQYIISSVDGPIYLIYFNKEYSELVLQFTNIQDST 977

Query: 192  DIIMYI 209
             I  Y+
Sbjct: 978  PIQTYL 983


>UniRef50_Q7RSZ4 Cluster: ABC transporter-like protein; n=10;
           Plasmodium|Rep: ABC transporter-like protein -
           Plasmodium yoelii yoelii
          Length = 1837

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 11/33 (33%), Positives = 26/33 (78%)
 Frame = -1

Query: 115 RYILSDIYKIFEYLQIVFFFKYFIRKLKIDIIK 17
           R++L+ + ++F Y+++++F K  IRKLK+ +++
Sbjct: 456 RFVLNILLELFLYIRMIYFKKKNIRKLKVYLLE 488


>UniRef50_Q4JCD1 Cluster: Conserved protein; n=1; Sulfolobus
           acidocaldarius|Rep: Conserved protein - Sulfolobus
           acidocaldarius
          Length = 428

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   YRQDYLIMS-IFNLRIKYLKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRM 179
           Y   Y IMS I N    Y  +  I     +LY +  I   V   ++    + N+SLKI  
Sbjct: 171 YANFYEIMSEIVNRATSYFGRTIILSGQCVLYKTSAIRNYVMSNDFTSSKIFNISLKI-- 228

Query: 180 SDNDDIIMYIGLRNFE 227
           SD+ D+  YI  R ++
Sbjct: 229 SDDRDLTEYIIERGYK 244


>UniRef50_Q8WTL6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 852

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 54  LKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDD 194
           L+K T+C Y ++L M DK+  A Y   Y Q     + + +RM D  D
Sbjct: 539 LRKMTLCSYIRLLRMCDKLRDADY---YYQGAKLAIKIYLRMIDRPD 582


>UniRef50_Q4YMR4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 35

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 139 IYSIRYTA-RYILSDIYKIFEYLQIVFFFKY 50
           IYSI Y+  +YI S  + IF Y  I+FFF Y
Sbjct: 1   IYSIFYSKIKYIFSGAFLIFFYFIILFFFIY 31


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,389,697
Number of Sequences: 1657284
Number of extensions: 4609121
Number of successful extensions: 12500
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12493
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)