Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30157
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical ...    31   0.34 
Z81047-3|CAB02829.1|  389|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81492-1|CAB04025.2|  326|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AL022288-2|CAA18370.1|  338|Caenorhabditis elegans Hypothetical ...    26   9.7  
AF022967-2|AAB69880.1|  305|Caenorhabditis elegans Hypothetical ...    26   9.7  

>AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical
           protein Y50D7A.4 protein.
          Length = 852

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 54  LKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDD 194
           L+K T+C Y ++L M DK+  A Y   Y Q     + + +RM D  D
Sbjct: 539 LRKMTLCSYIRLLRMCDKLRDADY---YYQGAKLAIKIYLRMIDRPD 582


>Z81047-3|CAB02829.1|  389|Caenorhabditis elegans Hypothetical
           protein C41G6.5 protein.
          Length = 389

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 76  NIRKFYICQIRYSERYTLLNIF 141
           NI KFYI Q+RY++R    NIF
Sbjct: 171 NILKFYINQVRYAKRKN-TNIF 191


>Z81492-1|CAB04025.2|  326|Caenorhabditis elegans Hypothetical
           protein E03H4.2 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 154 FIFS*IYSIRYTARYILSDIYKI--FEYLQIVFFFKYFIRKLKIDII 20
           +  S +  ++ ++ Y   D YK    E++ + +FFKY + K  IDI+
Sbjct: 188 YAVSGVNGVQKSSIYKEYDNYKTEATEHIAVDYFFKYILNKSLIDIL 234


>AL022288-2|CAA18370.1|  338|Caenorhabditis elegans Hypothetical
           protein ZK1025.3 protein.
          Length = 338

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 82  EYLQIVFFFKYFIRKLKIDII 20
           E++ + +FFKY + K  IDI+
Sbjct: 225 EHIAVDYFFKYILNKSLIDIL 245


>AF022967-2|AAB69880.1|  305|Caenorhabditis elegans Hypothetical
           protein C13A2.9 protein.
          Length = 305

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 91  KIFEYLQIVFFFKYFIRKLKIDII 20
           +I E++   +F K FIRK +IDI+
Sbjct: 184 EITEHVGAEYFLKNFIRKSRIDIL 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,694,252
Number of Sequences: 27780
Number of extensions: 117000
Number of successful extensions: 306
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)