Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30157
         (370 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.38 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.38 
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   6.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   8.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   8.1  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 325 LKNVHPYQSYYI 360
           LKN+ PY +YYI
Sbjct: 136 LKNIEPYNNYYI 147


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 325 LKNVHPYQSYYI 360
           LKN+ PY +YYI
Sbjct: 136 LKNIEPYNNYYI 147


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 72  CKYSKILYMSDKI*RAVYLIEYIQE 146
           C YS   Y ++   +  Y I YI++
Sbjct: 311 CNYSNNYYNNNNYKKLYYNINYIEQ 335


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 243 LLSNNKNMCIHKLL 284
           L++NN+ MC  KLL
Sbjct: 148 LVNNNQPMCSPKLL 161


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 135 IQ*GIPLAISYLT 97
           IQ G+PL + Y+T
Sbjct: 80  IQDGVPLTLGYVT 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,375
Number of Sequences: 438
Number of extensions: 1366
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)