Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30157
         (370 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g33620.1 68417.m04775 Ulp1 protease family protein low simila...    28   1.7  
At5g03020.1 68418.m00249 kelch repeat-containing F-box family pr...    27   5.2  
At4g24510.1 68417.m03514 eceriferum protein (CER2) identical to ...    27   5.2  
At1g22180.3 68414.m02773 SEC14 cytosolic factor family protein /...    26   6.8  
At1g22180.2 68414.m02774 SEC14 cytosolic factor family protein /...    26   6.8  
At1g22180.1 68414.m02772 SEC14 cytosolic factor family protein /...    26   6.8  
At1g02990.2 68414.m00269 expressed protein similar to mature-par...    26   6.8  

>At4g33620.1 68417.m04775 Ulp1 protease family protein low
           similarity to SP|Q9BQF6 SUMO-1-specific protease 2 (EC
           3.4.22.-) (Sentrin-specific protease SENP7) {Homo
           sapiens}; contains Pfam profile PF02902: Ulp1 protease
           family, C-terminal catalytic domain
          Length = 783

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/44 (22%), Positives = 26/44 (59%)
 Frame = +3

Query: 63  KTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDD 194
           +T+ K   +LY+ D        +EY+ ++ ++  +++++ D+DD
Sbjct: 668 ETLRKEGCMLYIEDSDDEEAVSVEYVSDSQDSYEVEMKVEDDDD 711


>At5g03020.1 68418.m00249 kelch repeat-containing F-box family
           protein similar to SKP1 interacting partner 6
           [Arabidopsis thaliana] GI:10716957; contains Pfam
           profiles PF01344: Kelch motif, PF00646: F-box domain
          Length = 347

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 193 ILLCI*DLETLNKSKDTYYQTTKICVYIN 279
           ILL   DL   N  K  +Y TTK C+ IN
Sbjct: 198 ILLTSLDLTVQNVFKKKHYFTTKACLVIN 226


>At4g24510.1 68417.m03514 eceriferum protein (CER2) identical to
           (CER2) [Arabidopsis thaliana] GI:1213594; contains Pfam
           profile PF02458: Transferase family
          Length = 421

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/52 (23%), Positives = 33/52 (63%)
 Frame = +3

Query: 39  LRIKYLKKKTICKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKIRMSDNDD 194
           +++ Y++     K ++   ++D +   ++ ++ + ++ ++VS +IRMSDND+
Sbjct: 35  MKLHYVRAVYFFKGARDFTVAD-VKNTMFTLQSLLQSYHHVSGRIRMSDNDN 85


>At1g22180.3 68414.m02773 SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein contains Pfam
           profile: PF00650 CRAL/TRIO domain; similar to
           polyphosphoinositide binding protein Ssh1p (GI:|2739044)
           {Glycine max}; similar to Phosphatidylinositol Transfer
           Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
          Length = 249

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 72  CKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKI 173
           C  + IL + D   + V+LI++   NM+++SLK+
Sbjct: 67  CMENAILNLPDNQEQMVWLIDFHGFNMSHISLKV 100


>At1g22180.2 68414.m02774 SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein contains Pfam
           profile: PF00650 CRAL/TRIO domain; similar to
           polyphosphoinositide binding protein Ssh1p (GI:|2739044)
           {Glycine max}; similar to Phosphatidylinositol Transfer
           Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
          Length = 314

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 72  CKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKI 173
           C  + IL + D   + V+LI++   NM+++SLK+
Sbjct: 132 CMENAILNLPDNQEQMVWLIDFHGFNMSHISLKV 165


>At1g22180.1 68414.m02772 SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein contains Pfam
           profile: PF00650 CRAL/TRIO domain; similar to
           polyphosphoinositide binding protein Ssh1p (GI:|2739044)
           {Glycine max}; similar to Phosphatidylinositol Transfer
           Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
          Length = 249

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 72  CKYSKILYMSDKI*RAVYLIEYIQENMNNVSLKI 173
           C  + IL + D   + V+LI++   NM+++SLK+
Sbjct: 67  CMENAILNLPDNQEQMVWLIDFHGFNMSHISLKV 100


>At1g02990.2 68414.m00269 expressed protein similar to
            mature-parasite-infected erythrocyte surface antigen
            (GI:160409) {Plasmodium falciparum}
          Length = 1238

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 220  TLNKSKDTYYQTTKICVYINYYLEQN 297
            T+ +SKD Y  T K+C +  +  E+N
Sbjct: 1050 TIARSKDIYGSTAKLCEFCAHEYEKN 1075


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,865,773
Number of Sequences: 28952
Number of extensions: 93050
Number of successful extensions: 177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 487896136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)