Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30156
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 74 7e-14
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 74 7e-14
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 68 3e-12
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 68 3e-12
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 66 1e-11
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 60 1e-09
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 39 0.002
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 37 0.007
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 37 0.007
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 35 0.030
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 35 0.030
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.052
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 33 0.16
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 33 0.16
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 2.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical ... 28 3.4
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 6.0
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 27 8.0
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 8.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 73.7 bits (173), Expect = 7e-14
Identities = 44/126 (34%), Positives = 60/126 (47%)
Frame = +2
Query: 110 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 290 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDL 469
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 470 RGKFVK 487
RGKFVK
Sbjct: 134 RGKFVK 139
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 73.7 bits (173), Expect = 7e-14
Identities = 44/126 (34%), Positives = 60/126 (47%)
Frame = +2
Query: 110 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 290 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDL 469
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 470 RGKFVK 487
RGKFVK
Sbjct: 134 RGKFVK 139
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 68.1 bits (159), Expect = 3e-12
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +2
Query: 110 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 290 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVND 466
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 467 LRGKFVK 487
LRGKFVK
Sbjct: 137 LRGKFVK 143
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 68.1 bits (159), Expect = 3e-12
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +2
Query: 110 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 290 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVND 466
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 467 LRGKFVK 487
LRGKFVK
Sbjct: 137 LRGKFVK 143
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 66.5 bits (155), Expect = 1e-11
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = +2
Query: 116 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 296 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLR 472
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 473 GKFVK 487
GKFVK
Sbjct: 151 GKFVK 155
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 66.5 bits (155), Expect = 1e-11
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = +2
Query: 116 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 296 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLR 472
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 473 GKFVK 487
GKFVK
Sbjct: 151 GKFVK 155
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +2
Query: 110 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 290 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVND 466
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 467 LRGKFVK 487
LRGKFVK
Sbjct: 149 LRGKFVK 155
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +2
Query: 110 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 290 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVND 466
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 467 LRGKFVK 487
LRGKFVK
Sbjct: 149 LRGKFVK 155
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +2
Query: 314 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 451
N + + +K K+ H+RI +LE EK+DLE +R++ ++ +LN
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELN 1088
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDL-RGKF 481
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 184
Query: 482 VK 487
+K
Sbjct: 185 LK 186
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDL-RGKF 481
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 288
Query: 482 VK 487
+K
Sbjct: 289 LK 290
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2
Query: 341 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 451
+K K+ H+RI +LE +K+DLE +R++ ++ +LN
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELN 252
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2
Query: 341 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 451
+K K+ H+RI +LE +K+DLE +R++ ++ +LN
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELN 252
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 314 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 448
N + + +K K+ H+RI +LE EK+DLE +R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 341 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN-XQVNDLRGKFVK 487
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALK 281
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 341 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN-XQVNDLRGKFVK 487
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALK 281
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 368 ERIARLEDEKFDLEYIVKRKDMEISDLNXQVND 466
E I L K + E ++K+KD+E+S + ++ D
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED 1106
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 320 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 448
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 320 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 448
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 320 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 448
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical
protein T23B12.5 protein.
Length = 224
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 486 LTNLPLRSLTWXFRSEISISFLLTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLG 307
L NLPL + W F S S+ L + R + L+ L++SS+ ++FL
Sbjct: 39 LLNLPLERIFWNFLSLSSVPLQLFVVLR-QYMLTFSTSNKLQLLRITLVISSVFQTLFLT 97
Query: 306 L 304
L
Sbjct: 98 L 98
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 338 TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVN 463
T KR+ + YH I L++ + Y +KRK + + + ++N
Sbjct: 200 TTKRLMEHYHIEIDNLKEAHSEEMYKIKRKYSTLEEYSEEIN 241
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 511 LEPFXRVGLDEFASEVVDLXVQVGDLHIFPFNDVFQI 401
+ P L FA E ++ V + D H PF+ ++QI
Sbjct: 159 VNPDTEKSLQNFAIESIEKLVALPDFHKVPFHQLYQI 195
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 332 EDTIKRVCKDYHERIARLEDEKFDLEY 412
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 311 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLRGKFVK 487
+N+ +KRV K + + + D K DL IVK++ E + + KF+K
Sbjct: 200 RNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLLKIVKQQKPEAQSVRDESAQAISKFIK 258
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 320 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLRGKFVK 487
DDA D + + E+ +L+ E ++ + K+ E +DL ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 320 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLRGKFVK 487
DDA D + + E+ +L+ E ++ + K+ E +DL ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 320 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLRGKFVK 487
DDA D + + E+ +L+ E ++ + K+ E +DL ++DLRG F K
Sbjct: 446 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 503
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 320 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNXQVNDLRGKFVK 487
DDA D + + E+ +L+ E ++ + K+ E +DL ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,428,512
Number of Sequences: 27780
Number of extensions: 102763
Number of successful extensions: 517
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -