Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30150
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...    73   3e-12
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    69   6e-11

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score = 73.3 bits (172), Expect = 3e-12
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -1

Query: 516 GDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 373
           G  ++++KD  EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P
Sbjct: 286 GGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 333


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 68.9 bits (161), Expect = 6e-11
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = -1

Query: 516 GDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 373
           G  E++ K+  EK+W+++  QF  RQK++LPKWFGERPGKKKG+ E+P
Sbjct: 256 GGYEEITKETNEKLWKDKIGQFDSRQKSKLPKWFGERPGKKKGDPETP 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,763,215
Number of Sequences: 1657284
Number of extensions: 3608948
Number of successful extensions: 11541
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11539
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)