Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30148
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 31 0.56
SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_44616| Best HMM Match : rve (HMM E-Value=0.012) 29 3.0
SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_56854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_47225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 27 6.9
SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 27 6.9
SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05) 27 6.9
SB_47005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 27 9.2
SB_24712| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9) 27 9.2
SB_12593| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_50077| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_2018| Best HMM Match : AIRC (HMM E-Value=5.1) 27 9.2
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 31.1 bits (67), Expect = 0.56
Identities = 23/94 (24%), Positives = 40/94 (42%)
Frame = +1
Query: 130 RLMLPRGTEGGFPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPN 309
R L + G +P QL + V PF KG P++ + + F + R N
Sbjct: 333 RRWLSEPSYGYWPQQLNLAVCPFTQKGN---PYKKAAFERLCIEFGMSRKPDFRWKGGRN 389
Query: 310 MYFKDIFIYHEGERFPYKFNLPSYDTQSNVVPKN 411
D+F+++ GE + + YDT ++ P +
Sbjct: 390 HGLGDVFVFYPGEGYRNVHVIRGYDTAADEYPSH 423
>SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +1
Query: 193 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNL 372
PF KG P++ + + F L R N D+F+++ GE + +
Sbjct: 155 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHGLDDVFVFYPGEGYRNMHVI 211
Query: 373 PSYDTQSNVVPKN 411
P YDT ++ P +
Sbjct: 212 PGYDTAADEYPSH 224
>SB_44616| Best HMM Match : rve (HMM E-Value=0.012)
Length = 1189
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 157 GGFPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFK-DIFI 333
G +P QL V PF KG P++ + + F L R D +K + D+F+
Sbjct: 376 GYWPQQLNFAVCPFTQKGN---PYKKAAFERLCIEFSLPRKP-DFRWKGGRNHGPGDVFV 431
Query: 334 YHEGERFPYKFNLPSYDTQSNVVPKN 411
++ GE + + YDT ++ P +
Sbjct: 432 FYPGEGYRNVHVILGYDTAADEYPSH 457
>SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +1
Query: 157 GGFPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIY 336
G +P QL V PF KG P++ V + + F L R N D+F++
Sbjct: 238 GYWPQQLNFAVCPFTQKGN---PYKKAVFERLCIEFGLPRNPDFRWKGGRNHGLGDVFVF 294
Query: 337 HEGERFPYKFNLPSYDTQSNVVPKN 411
+ GE + YDT ++ P +
Sbjct: 295 YPGEGNRNVHVIRGYDTAADEYPSH 319
>SB_56854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 272 IAPLLMHYSRFLTCISRIFSFTTRVNGSLTNSIFLRMTHS 391
I PL+ L C+S + T ++GSL++ + ++TH+
Sbjct: 45 ILPLVPRPKELLECVSNMRLLTWLLHGSLSHMVHSKITHA 84
>SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +1
Query: 193 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNL 372
PF KGK P++ + + F L R L N D+F+++ GE + +
Sbjct: 203 PFTQKGK---PYKKAAFERLCIEFGLPRKPDFRLKGGRNHGLGDVFVFYPGEGYRNVHVI 259
Query: 373 PSYDTQSNVVPKN 411
YDT + P +
Sbjct: 260 RGYDTAMDEYPSH 272
>SB_47225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +1
Query: 193 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNL 372
PF KG P++ + + F L R N D+F+++ GER+ +
Sbjct: 186 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHGLGDVFVFYPGERYRNVHVI 242
Query: 373 PSYDTQSNVVPKN 411
YDT ++ P +
Sbjct: 243 RGYDTAADEYPSH 255
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 295 IMHQQRGDPEGSQEAYCQEQKIRKEPSPCLCCRMDRRKQRA 173
++HQ++ E Q++ C E+++ +E + L C + KQRA
Sbjct: 1623 LLHQEKLLKEKQQQSACVEKQVEQELA-LLRCELAEAKQRA 1662
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 34 KEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLMLPRGTEGG 162
K++ TE LDE K D+ E Y K+ +P+GT+ G
Sbjct: 592 KKEVSAATESKDALDETKKCKDLPVENAYENKKNYVPQGTQAG 634
>SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13)
Length = 874
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 195 WIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSF-VEHLHN 61
W D KEL F S H+ F ++T+ + + +Y F V +H+
Sbjct: 402 WGDRLKELIKYKGFQVSTIHDRFGYITDRLKELIKYKGFQVSAIHD 447
>SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05)
Length = 492
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 174 LEWESTFSTSRQHESFRHVTELFRH 100
LEW +FS + + F H+TEL RH
Sbjct: 369 LEWRLSFSNAEK-TLFAHMTELMRH 392
>SB_47005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +1
Query: 193 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNL 372
PF KG P++ + + F L R V N D+F+++ GE + +
Sbjct: 177 PFTQKGN---PYKKAAFERLCIEFGLPRKQVFRWKGGRNHGLGDVFVFYPGEGYCNVHVI 233
Query: 373 PSYDTQSNVVPKN 411
YDT ++ P +
Sbjct: 234 RGYDTAADEYPSH 246
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 223 PFESFVLDNKPLGFPLDRPV 282
PF+ FV K +GFP+ +PV
Sbjct: 250 PFDDFVKRYKVIGFPMHKPV 269
>SB_24712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 193 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNL 372
PF KG P++ + + F L R + N D+F+++ GE + +
Sbjct: 179 PFTQKGN---PYKKAAFERLCIEFGLPRKLDFRWKGGRNHGLGDVFVFYPGEGYRNVHVI 235
Query: 373 PSYDTQSNVVPKN 411
SYDT ++ P +
Sbjct: 236 CSYDTAADEYPSH 248
>SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9)
Length = 842
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 193 PFDNKGKDL--APFESFVLD-NKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYK 363
PF KG A FE ++ P G P++R N D+F+++ GER
Sbjct: 132 PFTQKGNPYKKAAFERLCIEFGLPPGLPMERR--------RNHGLGDVFVFYPGERCRNV 183
Query: 364 FNLPSYDTQSNVVPKN 411
+ YDT ++ P +
Sbjct: 184 HVIRGYDTAADKYPSH 199
>SB_12593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 322 DIFIYHEGERFPYKFNLPSYDTQSNVVPKN 411
D+F+++ GE + +P YDT ++ P +
Sbjct: 259 DVFVFYPGEGYRNVHVIPGYDTAADEYPSH 288
>SB_50077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 193 PFDNKGKDL--APFESFVLD-NKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYK 363
PF KG A FE ++ P G P++R L D+F+++ GE +
Sbjct: 128 PFTQKGNPYKKAAFERLCIEFGLPPGLPMERRAEHGL--------GDVFVFYPGEGYRNV 179
Query: 364 FNLPSYDTQSNVVPKN 411
+ YDT ++ P +
Sbjct: 180 HVIRGYDTAADEYPSH 195
>SB_2018| Best HMM Match : AIRC (HMM E-Value=5.1)
Length = 298
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 322 DIFIYHEGERFPYKFNLPSYDTQSNVVPKN 411
D+F+++ GE + +P YDT ++ P +
Sbjct: 253 DVFVFYPGEGYRNVHVIPGYDTAADEYPSH 282
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,681,257
Number of Sequences: 59808
Number of extensions: 344756
Number of successful extensions: 1060
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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