Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30148
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical pr...    30   0.85 
AF101316-5|AAC69233.2|   99|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z70286-4|CAA94291.2|  533|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AJ582070-1|CAE46540.1|  533|Caenorhabditis elegans flavin monoox...    28   4.6  
Z66500-1|CAA91303.1|  325|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase ...    27   6.0  
AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threon...    27   6.0  
Z81055-9|CAB02898.3|  562|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p...    27   8.0  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p...    27   8.0  
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass...    27   8.0  
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass...    27   8.0  

>Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical
           protein F26D2.7 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = -1

Query: 258 KRLIVKNKRFERSQVLAFVVEWIDENKELEWE--STFSTSRQHESFRHVTELFRHIKRYF 85
           + +I KN  FE S V  F++   +EN  ++W+  S   ++     F++   +F  +K YF
Sbjct: 163 REVIRKNFDFEISSVARFIMMPYNENNTIQWKALSLLISAGILICFQYFIFVFFGLKIYF 222

Query: 84  SFVEHLHNFS 55
           +    L +FS
Sbjct: 223 NMKLRLKSFS 232


>AF101316-5|AAC69233.2|   99|Caenorhabditis elegans Hypothetical
           protein F52F10.1 protein.
          Length = 99

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 503 LFFLNHNSYT*SFYIFFGYYGCKIHQ 426
           ++F NHNS +  F++ F    C+ HQ
Sbjct: 21  IYFFNHNSVSFQFFLVFQKLTCRSHQ 46


>Z70286-4|CAA94291.2|  533|Caenorhabditis elegans Hypothetical
           protein K08C7.2 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -1

Query: 243 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 73
           K +  E S V+   V  I+ +KE+   S F    +  +F H TE++R++  Y    E
Sbjct: 47  KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101


>AJ582070-1|CAE46540.1|  533|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -1

Query: 243 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 73
           K +  E S V+   V  I+ +KE+   S F    +  +F H TE++R++  Y    E
Sbjct: 47  KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101


>Z66500-1|CAA91303.1|  325|Caenorhabditis elegans Hypothetical
           protein T05C12.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 216 VLAFVVEWIDENKELEWE 163
           +LA+ V+++D+N E EW+
Sbjct: 304 ILAYCVKFVDDNAEFEWD 321


>U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase
           protein 29 protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
 Frame = +1

Query: 43  SVPMTEIMKMLDEG----KVPFDMSEEFCYMP-----KRLMLPRGTEGG 162
           ++P TE++  L       K+PF  S E  Y P     +RL LP G E G
Sbjct: 729 TLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIG 777


>AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threonine
           kinase KIN-29 protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
 Frame = +1

Query: 43  SVPMTEIMKMLDEG----KVPFDMSEEFCYMP-----KRLMLPRGTEGG 162
           ++P TE++  L       K+PF  S E  Y P     +RL LP G E G
Sbjct: 729 TLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIG 777


>Z81055-9|CAB02898.3|  562|Caenorhabditis elegans Hypothetical
           protein F01G10.10 protein.
          Length = 562

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 396 IRLCVIRRKIEFVREPFTLVVNENILEIHVRNLE*CINNGAI 271
           I L ++   + ++RE    V+NE IL++ + N+   I NG +
Sbjct: 39  IYLRIMPNGLAYLREVGMKVINEQILKLQLPNIREPIENGEV 80


>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
           protein F10B5.7 protein.
          Length = 1780

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 329 SFTTRVNGSLTNSIFLRMTHSLMLFQKI 412
           SFT+R+ G L + +FL +     LF KI
Sbjct: 277 SFTSRITGMLHDQVFLEVPKMHTLFTKI 304


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 292  MHQQRGDPEGSQEAYCQEQKIRKEPSP 212
            M+Q   +P+G  ++Y Q+Q +  +P P
Sbjct: 2949 MNQGSSNPQGGMQSYQQQQPVLGQPGP 2975


>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
           protein F10B5.7 protein.
          Length = 1780

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 329 SFTTRVNGSLTNSIFLRMTHSLMLFQKI 412
           SFT+R+ G L + +FL +     LF KI
Sbjct: 277 SFTSRITGMLHDQVFLEVPKMHTLFTKI 304


>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform b protein.
          Length = 4034

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -1

Query: 186  ENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVEHLHNFSHWHGV 40
            E +E+  E   S S  HE   +    + H   ++S     H  S  HG+
Sbjct: 1304 ELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSSFYHQESDEHGL 1352


>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform c protein.
          Length = 7548

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -1

Query: 186  ENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVEHLHNFSHWHGV 40
            E +E+  E   S S  HE   +    + H   ++S     H  S  HG+
Sbjct: 1304 ELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSSFYHQESDEHGL 1352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,964,514
Number of Sequences: 27780
Number of extensions: 269400
Number of successful extensions: 750
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)