Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30143
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   1.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   2.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   2.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 447 IYHRIGNCVCGLIYSPSPSSQATGSTLTV 361
           +Y  IG+ VC   Y P P+ +   S + V
Sbjct: 193 LYDHIGDLVCVDFYGPLPTGRLGASYVFV 221


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 420 CGLIYSPSPSSQATGSTLTVTGEG 349
           C +I   + +   +G T+TV G+G
Sbjct: 443 CDVISGNAENGSCSGKTITVGGDG 466


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 420 CGLIYSPSPSSQATGSTLTVTGEG 349
           C +I   + +   +G T+TV G+G
Sbjct: 444 CDVISGNAENGSCSGKTITVGGDG 467


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 420 CGLIYSPSPSSQATGSTLTVTGEG 349
           C +I   + +   +G T+TV G+G
Sbjct: 444 CDVISGNAENGSCSGKTITVGGDG 467


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 312 WRRHRYISAVSVSLLRSPSTSNP 380
           W+   + ++ +  LL++PS S+P
Sbjct: 83  WKHLDFRNSATAELLKNPSLSSP 105


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 312 WRRHRYISAVSVSLLRSPSTSNP 380
           W+   + ++ +  LL++PS S+P
Sbjct: 83  WKHLDFRNSATAELLKNPSLSSP 105


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 344 GEPSPVTVNVEPVACDE 394
           GEP P TVN+  +  +E
Sbjct: 280 GEPGPYTVNLGSLGYNE 296


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 195 FLKRRLKLPHFISI 236
           FLK   KL HF+SI
Sbjct: 12  FLKVMYKLSHFLSI 25


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 134 YTEMVLLNSMLHAVNTNLTFH 72
           YT+     S+ HA  T+L  H
Sbjct: 141 YTDPAFAASIFHAAATSLPLH 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,066
Number of Sequences: 336
Number of extensions: 2426
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)