Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30143
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 30 0.85
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 30 0.85
Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical pr... 28 4.6
U80031-5|AAB37615.1| 547|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 28 4.6
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 27 8.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 27 8.0
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 216 LPHFISIQHTLLYLNLLYSYHFHLGP*LTETPWRRHRYISAVSVSL 353
L HF S H + YLN+++SY+ +L L + P RR + + + +L
Sbjct: 317 LEHFSSEYHAMKYLNMIHSYNSYLAQQL-DGPERRAKALKMLISTL 361
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 216 LPHFISIQHTLLYLNLLYSYHFHLGP*LTETPWRRHRYISAVSVSL 353
L HF S H + YLN+++SY+ +L L + P RR + + + +L
Sbjct: 317 LEHFSSEYHAMKYLNMIHSYNSYLAQQL-DGPERRAKALKMLISTL 361
>Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical
protein K04H8.3 protein.
Length = 222
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 237 QHTLLYLNLLYSYHFHLGP*LTET--PWRRHRYISAVSVSLLRSPSTSNPSLATK 395
Q L Y N + S HFHL LTET RY++ + + L + + + TK
Sbjct: 109 QLNLRYYNFICSSHFHLDCKLTETLQICMTDRYVAVLGLPLAFDTDSQDLTFLTK 163
>U80031-5|AAB37615.1| 547|Caenorhabditis elegans Hypothetical
protein B0554.2 protein.
Length = 547
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 347 EPS-PVTVNVEPVACDEGLGE*INPQTQFPIRW*ILRSTA 463
+PS PVT + P A G+G+ +NP+ Q + + +TA
Sbjct: 305 DPSGPVTRSCSPTALTYGMGDGMNPEVQIGVTYTDFMTTA 344
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 247 KVCWIEMKCGSLRRRFKNPSICYYGATFIGSLSEDDFNTLRWYSLIL 107
K C+I + ++ +I YY A I S ++++T+ W S+IL
Sbjct: 279 KACFIGSMLQAFQQLAGINTILYYTADIIRSAGIENYHTIIWISVIL 325
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1670 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1699
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1763 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1792
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1763 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1792
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1670 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1699
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1763 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1792
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1763 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1792
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 432 GNCVCGLIYSP--SPSSQATGSTLTVTGEGSP 343
G VC +YSP SP + STL VT EG+P
Sbjct: 1762 GEYVC--LYSPENSPPVKTNPSTLNVTPEGTP 1791
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,453,978
Number of Sequences: 27780
Number of extensions: 223857
Number of successful extensions: 590
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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