Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30140
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.1  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   4.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.5  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 174 LLSCSLPLKRL*CCL 130
           LLSCS P K+L  C+
Sbjct: 27  LLSCSFPKKKLVYCI 41


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 174 LLSCSLPLKRL*CCL 130
           LLSCS P K+L  C+
Sbjct: 23  LLSCSFPKKKLVYCI 37


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 356 Y*WSQRFRDAHKCTQLGNFFCRNALSS 276
           Y W +  +   K +Q GNF  RN + +
Sbjct: 115 YPWMKEKKTTRKSSQQGNFEFRNTVGA 141


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +3

Query: 102 LVLSKRMNVQDSIIGALAGVS-RIAGCLMFA---LAPTRQWFYSAPLFNIFSFTGLTAIR 269
           L LSK  N    I+G + G+S      L FA   L   +  F   P   + SF  LT ++
Sbjct: 201 LALSKCQNTPIGILGRIKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQ 260


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +3

Query: 102 LVLSKRMNVQDSIIGALAGVS-RIAGCLMFA---LAPTRQWFYSAPLFNIFSFTGLTAIR 269
           L LSK  N    I+G + G+S      L FA   L   +  F   P   + SF  LT ++
Sbjct: 201 LALSKCQNTPIGILGRIKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQ 260


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory
          receptor candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 83 QKTDDDINCPINTVFHL 33
          Q+   D NC I  +FHL
Sbjct: 34 QRLKTDKNCTIVIIFHL 50


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
          acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 20 IWLYGGG 40
          +W+YGGG
Sbjct: 44 VWIYGGG 50


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 221 RSSIQHLQFYWS 256
           R+ ++ L FYWS
Sbjct: 312 RNDLERLYFYWS 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,644
Number of Sequences: 336
Number of extensions: 2637
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)