Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30140
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1528 + 38011391-38011635,38012366-38012566,38012659-380128...    28   3.9  
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001     28   3.9  
11_01_0802 - 7115854-7116778,7117087-7117211,7118947-7119426,712...    28   5.1  
08_02_1511 + 27623375-27623592,27623956-27623962                       28   5.1  
06_01_0124 - 958935-959967,959985-961222                               28   5.1  
08_02_1539 - 27690412-27690588,27690694-27690834,27691493-276915...    27   8.9  

>01_06_1528 +
           38011391-38011635,38012366-38012566,38012659-38012836,
           38012946-38013208,38013380-38013649,38013753-38014950
          Length = 784

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +3

Query: 144 GALAGVSRI----AGCLMFALAPTRQWFYSAPLFNIFSFTGLTAI 266
           GA AGV+       G ++FAL     W+ SA L+  FS T + A+
Sbjct: 270 GAAAGVTAAFRAPVGGVLFALEEATSWWRSALLWRTFSTTAVAAM 314


>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
          Length = 1472

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 351 SIYMPASSYIYMSTIETFPGAFYLFDAALTVVALCL 458
           ++Y+P  SY  +  I  F  A  LF A + +  LCL
Sbjct: 160 NLYIPICSYALLLLIHLFTAAPVLFMAEVVLAGLCL 195


>11_01_0802 -
           7115854-7116778,7117087-7117211,7118947-7119426,
           7120005-7120222,7120351-7120441
          Length = 612

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 27  FTEVEYSIYGTINIVVGLLGTIFCILVLSKRMNVQDSIIGA 149
           F E+ Y +  + NIV   +GT+F + +L   ++  DS +G+
Sbjct: 52  FNEMHYPLSKSANIVTNFIGTVFLLSLLGGFLS--DSYLGS 90


>08_02_1511 + 27623375-27623592,27623956-27623962
          Length = 74

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 361 MYIDGANDSVTPISALSLATSSVGTLLVAIDLIAVR 254
           M   G   S  P+SA +LA +     +VA+DL A R
Sbjct: 38  MQTGGRGSSPLPLSASALAVAPAAAAVVAVDLEATR 73


>06_01_0124 - 958935-959967,959985-961222
          Length = 756

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 339 SLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVA-LCLFGMIYI-LARKK 491
           S++ ++++P +SY++       PGA    DA L + A L L  M+ + L RKK
Sbjct: 73  SVSLALFLPVTSYLFSEAKNDVPGAGDATDAELPLRARLILAWMLLVELLRKK 125


>08_02_1539 -
           27690412-27690588,27690694-27690834,27691493-27691588,
           27691694-27691786,27691909-27692103,27692340-27692438,
           27692527-27692753,27692841-27692973
          Length = 386

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = -3

Query: 265 IAVRPVKLKMLNRGAE*NHCLVGARANMRHPAILLTPAKAPIMLSWTFIRLLSTNIQNMV 86
           +A  P +L    R A  +        +  HP +   P    ++++      + T+I    
Sbjct: 7   LAALPSQLASPARRAALSRSATARPRHHHHPLLRAPPKGCRLVVTCNAQTAVPTSIAQGT 66

Query: 85  PKRPTTILIV 56
           P RPT+IL+V
Sbjct: 67  PVRPTSILVV 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,755,197
Number of Sequences: 37544
Number of extensions: 268067
Number of successful extensions: 580
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)