Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30140
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 4... 40 0.004
AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal co-trans... 40 0.004
AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal co-trans... 40 0.004
AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens ... 40 0.005
EF028166-1|ABM74557.1| 122|Homo sapiens XIAP-associated factor ... 31 2.4
BC117415-1|AAI17416.1| 1074|Homo sapiens PRDM10 protein protein. 29 7.3
BC112934-1|AAI12935.1| 1156|Homo sapiens PR domain containing 10... 29 7.3
AK000234-1|BAA91026.1| 931|Homo sapiens protein ( Homo sapiens ... 29 7.3
AF503171-1|AAP30847.1| 1023|Homo sapiens tristanin protein. 29 7.3
AF275817-1|AAF87243.1| 1061|Homo sapiens PR-domain containing pr... 29 7.3
AB033057-1|BAA86545.2| 1061|Homo sapiens KIAA1231 protein protein. 29 7.3
>BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 46,
member 2 protein.
Length = 475
Score = 40.3 bits (90), Expect = 0.004
Identities = 31/143 (21%), Positives = 65/143 (45%)
Frame = +3
Query: 24 GFTEVEYSIYGTINIVVGLLGTIFCILVLSKRMNVQDSIIGALAGVSRIAGCLMFALAPT 203
G+ +V+ YG + + +LV S+ +D+ + + VS +G L+ A
Sbjct: 314 GWNQVQVG-YGMAAGYTIFITSFLGVLVFSRCF--RDTTMIMIGMVSFGSGALLLAFVKE 370
Query: 204 RQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIY 383
FY A +F+ +T IRS +K + K+ ++ ++ +L + + IY
Sbjct: 371 TYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTLYNKIY 430
Query: 384 MSTIETFPGAFYLFDAALTVVAL 452
T++ F G+ + + L+ +A+
Sbjct: 431 QLTMDMFVGSCFALSSFLSFLAI 453
>AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal
co-transporter protein.
Length = 475
Score = 40.3 bits (90), Expect = 0.004
Identities = 31/143 (21%), Positives = 65/143 (45%)
Frame = +3
Query: 24 GFTEVEYSIYGTINIVVGLLGTIFCILVLSKRMNVQDSIIGALAGVSRIAGCLMFALAPT 203
G+ +V+ YG + + +LV S+ +D+ + + VS +G L+ A
Sbjct: 314 GWNQVQVG-YGMAAGYTIFITSFLGVLVFSRCF--RDTTMIMIGMVSFGSGALLLAFVKE 370
Query: 204 RQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIY 383
FY A +F+ +T IRS +K + K+ ++ ++ +L + + IY
Sbjct: 371 TYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTLYNKIY 430
Query: 384 MSTIETFPGAFYLFDAALTVVAL 452
T++ F G+ + + L+ +A+
Sbjct: 431 QLTMDMFVGSCFALSSFLSFLAI 453
>AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal
co-transporter protein.
Length = 475
Score = 40.3 bits (90), Expect = 0.004
Identities = 31/143 (21%), Positives = 65/143 (45%)
Frame = +3
Query: 24 GFTEVEYSIYGTINIVVGLLGTIFCILVLSKRMNVQDSIIGALAGVSRIAGCLMFALAPT 203
G+ +V+ YG + + +LV S+ +D+ + + VS +G L+ A
Sbjct: 314 GWNQVQVG-YGMAAGYTIFITSFLGVLVFSRCF--RDTTMIMIGMVSFGSGALLLAFVKE 370
Query: 204 RQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIY 383
FY A +F+ +T IRS +K + K+ ++ ++ +L + + IY
Sbjct: 371 TYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTLYNKIY 430
Query: 384 MSTIETFPGAFYLFDAALTVVAL 452
T++ F G+ + + L+ +A+
Sbjct: 431 QLTMDMFVGSCFALSSFLSFLAI 453
>AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ31009 fis, clone HLUNG2000142, moderately
similar to Mus musculus putative thymic stromal
co-transporter TSCOT mRNA. ).
Length = 475
Score = 39.9 bits (89), Expect = 0.005
Identities = 31/143 (21%), Positives = 65/143 (45%)
Frame = +3
Query: 24 GFTEVEYSIYGTINIVVGLLGTIFCILVLSKRMNVQDSIIGALAGVSRIAGCLMFALAPT 203
G+ +V+ YG + + +LV S+ +D+ + + VS +G L+ A
Sbjct: 314 GWNQVQVG-YGMAAGYTIFITSFLGVLVFSRCF--RDTTMIMIGMVSFGSGALLLAFVKE 370
Query: 204 RQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIY 383
FY A +F+ +T IRS +K + K+ ++ ++ +L + + IY
Sbjct: 371 TYMFYIARAAMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTLYNKIY 430
Query: 384 MSTIETFPGAFYLFDAALTVVAL 452
T++ F G+ + + L+ +A+
Sbjct: 431 QLTMDMFVGSCFALSSFLSFLAI 453
>EF028166-1|ABM74557.1| 122|Homo sapiens XIAP-associated factor 1
isoform E protein.
Length = 122
Score = 31.1 bits (67), Expect = 2.4
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -1
Query: 513 HSLTKQCFSFALKCRSCRIDIELQQLRLHQT 421
H +C ++C+ C++D++L +L LH++
Sbjct: 54 HQQANECQERPVECKFCKLDMQLSKLELHES 84
>BC117415-1|AAI17416.1| 1074|Homo sapiens PRDM10 protein protein.
Length = 1074
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 489 SFALKCRSCRIDIELQQLRLHQTSKMHPEM 400
SF KCR C + + + ++ SK HP+M
Sbjct: 638 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDM 667
>BC112934-1|AAI12935.1| 1156|Homo sapiens PR domain containing 10
protein.
Length = 1156
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 489 SFALKCRSCRIDIELQQLRLHQTSKMHPEM 400
SF KCR C + + + ++ SK HP+M
Sbjct: 720 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDM 749
>AK000234-1|BAA91026.1| 931|Homo sapiens protein ( Homo sapiens
cDNA FLJ20227 fis, clone COLF5152. ).
Length = 931
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 489 SFALKCRSCRIDIELQQLRLHQTSKMHPEM 400
SF KCR C + + + ++ SK HP+M
Sbjct: 437 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDM 466
>AF503171-1|AAP30847.1| 1023|Homo sapiens tristanin protein.
Length = 1023
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 489 SFALKCRSCRIDIELQQLRLHQTSKMHPEM 400
SF KCR C + + + ++ SK HP+M
Sbjct: 634 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDM 663
>AF275817-1|AAF87243.1| 1061|Homo sapiens PR-domain containing
protein 10 protein.
Length = 1061
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 489 SFALKCRSCRIDIELQQLRLHQTSKMHPEM 400
SF KCR C + + + ++ SK HP+M
Sbjct: 638 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDM 667
>AB033057-1|BAA86545.2| 1061|Homo sapiens KIAA1231 protein protein.
Length = 1061
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 489 SFALKCRSCRIDIELQQLRLHQTSKMHPEM 400
SF KCR C + + + ++ SK HP+M
Sbjct: 638 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDM 667
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,080,005
Number of Sequences: 237096
Number of extensions: 1501147
Number of successful extensions: 2874
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2874
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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