Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30140
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 30 0.85
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 30 0.85
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 30 0.85
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 28 4.6
Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 27 6.0
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 27 6.0
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 30.3 bits (65), Expect = 0.85
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = -2
Query: 335 RDAHKCTQLGNFFCRNALSSY*PDCCQTSKTED-VE*RSGIEPLS--GRSKGEHEASCYP 165
R +CTQL CR Y +CC K E V ++GIE G S P
Sbjct: 464 RSRPQCTQLITDLCRTQAVEYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMP 523
Query: 164 AHSR*SAYNAVLD 126
H N+ LD
Sbjct: 524 VHFMVYPNNSTLD 536
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 30.3 bits (65), Expect = 0.85
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = -2
Query: 335 RDAHKCTQLGNFFCRNALSSY*PDCCQTSKTED-VE*RSGIEPLS--GRSKGEHEASCYP 165
R +CTQL CR Y +CC K E V ++GIE G S P
Sbjct: 464 RSRPQCTQLITDLCRTQAVEYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMP 523
Query: 164 AHSR*SAYNAVLD 126
H N+ LD
Sbjct: 524 VHFMVYPNNSTLD 536
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 30.3 bits (65), Expect = 0.85
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = -2
Query: 335 RDAHKCTQLGNFFCRNALSSY*PDCCQTSKTED-VE*RSGIEPLS--GRSKGEHEASCYP 165
R +CTQL CR Y +CC K E V ++GIE G S P
Sbjct: 464 RSRPQCTQLITDLCRTQAVEYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMP 523
Query: 164 AHSR*SAYNAVLD 126
H N+ LD
Sbjct: 524 VHFMVYPNNSTLD 536
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 312 LSALMGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVALCLFGMIYI 476
+S + VT+ + +Y+ +S M+ I F G F + +VA CL + ++
Sbjct: 144 VSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHISFCILILIVATCLLPLCFL 198
>Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical
protein F59A1.13 protein.
Length = 421
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +3
Query: 255 LTAIRSIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAA 434
+T + I PT E A++ L+ I MP S ++ S + +Y+F +
Sbjct: 108 MTVVGVIPGTWAPTSETGTFMAILSCVFQLSMIICMPVSGFLCESRF-GWRSIYYIFGGS 166
Query: 435 LTVVALCLFGMIY 473
T++ +F + Y
Sbjct: 167 -TIIFYAIFYIFY 178
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +3
Query: 270 SIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVA 449
S+ S ++++ SLAP IY+P S++ + + FP F ++TV
Sbjct: 1179 SVNADSKSISSTPRMNSSSSSLASLAPGIYVPGPSHL-TAILHVFPPLFDKVAKSITVDD 1237
Query: 450 LCLFGMIYILARKKNIAL 503
L + +L N+ +
Sbjct: 1238 LKYESLPAVLESMMNVPI 1255
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +3
Query: 270 SIATKSVPTEEVAKLSALMGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVA 449
S+ S ++++ SLAP IY+P S++ + + FP F ++TV
Sbjct: 1179 SVNADSKSISSTPRMNSSSSSLASLAPGIYVPGPSHL-TAILHVFPPLFDKVAKSITVDD 1237
Query: 450 LCLFGMIYILARKKNIAL 503
L + +L N+ +
Sbjct: 1238 LKYESLPAVLESMMNVPI 1255
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 140 NAVLDIHSFAEH*YTKYGSQKTDDDINCPINTVFHLRKAKFS 15
N+VL + T+YG Q + +NCP++ + + A+FS
Sbjct: 331 NSVLQALVTVDSFQTRYGEQGLETLVNCPLDKLHNDFNAQFS 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,917,767
Number of Sequences: 27780
Number of extensions: 238909
Number of successful extensions: 585
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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