Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30136
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0504 - 19771191-19772134,19772210-19774892                       29   2.2  
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336...    28   3.9  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   3.9  
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364...    28   3.9  
09_02_0060 + 3729613-3729863,3730377-3730392                           28   5.1  
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634...    27   6.8  

>12_02_0504 - 19771191-19772134,19772210-19774892
          Length = 1208

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -2

Query: 323 YFLVKATIHHLNVVHFIFNFHVDKILRISFVWSR*NEAGGVGALDN-SYVVGV*EHXPGS 147
           YF     +  L+ +H   N  + KIL+I  + S   E  G+G  +N  + + V  +  G 
Sbjct: 652 YFNYIHKLQSLHCLHVPENIMLSKILQIGMLTSL-QELHGIGVAENDGHSMSVLSNLTGL 710

Query: 146 CRLWRSMLFCRNIQN 102
           CRL  S+   +N++N
Sbjct: 711 CRL--SLRNLQNVRN 723


>06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,
            3363820-3364098,3364189-3364386,3364475-3365110,
            3365209-3365463,3365579-3365685,3365770-3369566,
            3369677-3370166,3370918-3371308,3371481-3371573,
            3371687-3371810,3372544-3372791
          Length = 2380

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 399  PNNEDRIAYLTGRCWPK 449
            PNNE+ + Y   +CWP+
Sbjct: 1134 PNNENMVGYNNKKCWPR 1150


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 312 DEKICYNYGIIKENEQFVM 368
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


>05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,
            3645328-3645525,3645614-3646249,3646352-3646606,
            3646718-3646824,3646909-3650705,3650816-3651305,
            3652043-3652433,3652621-3652713,3652818-3652941,
            3653871-3654118
          Length = 2350

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 399  PNNEDRIAYLTGRCWPK 449
            PNNE+ + Y   +CWP+
Sbjct: 1134 PNNENMVGYNNKKCWPR 1150


>09_02_0060 + 3729613-3729863,3730377-3730392
          Length = 88

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 173 LLHSYYPALRHRQLRSTCSIRSLSSIFCQ 259
           L+H+ +P  R+R  R+TC  R++ S+ C+
Sbjct: 32  LVHAKWPPSRYRSYRATC-CRAVPSLLCR 59


>03_02_0197 +
           6337212-6337278,6339261-6340517,6340599-6340626,
           6340735-6340897
          Length = 504

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   GFLPKNLEFSIFYE-KMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGNVLIRLLHS 184
           G +P  L++++F      +EA+    L +Y   F+     A +A  Y+N  NV + +  +
Sbjct: 210 GVIP--LDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDAAYFAMAYLNVTNVPVMVTET 267

Query: 185 YYP 193
            +P
Sbjct: 268 GWP 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,365,942
Number of Sequences: 37544
Number of extensions: 246292
Number of successful extensions: 594
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)