Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30134
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 34 0.078
08_02_1275 - 25792148-25792227,25792457-25792488,25792590-257926... 29 2.2
05_04_0081 + 17759158-17760021 29 2.9
04_01_0340 + 4435344-4435637 28 3.9
01_06_0513 - 29944888-29945943 28 3.9
11_05_0075 + 18856659-18856878,18856890-18857107,18858253-188583... 28 5.1
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 28 5.1
04_04_0650 + 26950912-26951397,26951552-26951728 28 5.1
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 27 6.8
08_01_0281 - 2290348-2290637,2290846-2291032 27 6.8
06_01_0919 - 7090494-7091219,7091630-7091763,7091860-7091927,709... 27 6.8
08_02_0360 + 16196712-16197560,16198126-16198875 27 8.9
06_01_0839 + 6365962-6366798 27 8.9
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 27 8.9
02_03_0070 - 14755864-14756157,14756853-14757011 27 8.9
02_02_0335 + 9063749-9064216,9064846-9064890,9065351-9065470,906... 27 8.9
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 27 8.9
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 33.9 bits (74), Expect = 0.078
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 102 KKLEADINELEIALD-HANKA--NAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLG 272
K++EA I+ L+ + H +KA + + +++++ +++K +Q AL L
Sbjct: 230 KEMEAQISSLQEEIKGHQDKAIDHQQVEESLRSTLSELKMVQEALELSKSQVDDLEQKLA 289
Query: 273 ISERRANALQNELEESRTLLEQADRARRQAEQELSDAHE 389
+ + L EL R+ E + E ELS AHE
Sbjct: 290 SQDANISHLTEELSLHRSSEESLKEKTLKLENELSSAHE 328
Score = 28.7 bits (61), Expect = 2.9
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 117 DINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANA 296
++ E+EI L+ K + +++ Q QI +LQT L +
Sbjct: 336 NLQEMEIKLEEQAKEKQTWEATLEKQQEQILNLQTELDESKGGNETLRGTIA-------D 388
Query: 297 LQNELEESRTLLEQADRARRQAEQELSDA 383
L ++L E +LL QA+ +A+ LS+A
Sbjct: 389 LNSKLAERDSLLRQAEDEHAKAQLLLSEA 417
>08_02_1275 -
25792148-25792227,25792457-25792488,25792590-25792651,
25792721-25792801,25793086-25793241,25793292-25793348,
25793349-25793510,25793586-25793648,25793742-25793804,
25793895-25793948,25794334-25794390,25794479-25794547,
25795053-25795166,25795245-25795316,25795406-25795527,
25796416-25796617
Length = 481
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 138 ALDHANKANAEAQKNIKRYQAQIKDLQT-ALXXXXXXXXXXXXXLGISERRA--NALQNE 308
A + A KANA A + K+ KD++ ++ + E A +ALQ
Sbjct: 115 AEEQAGKANARAVELEKQIDKLKKDVEAQSVKKATLENRANDAEKRVQELNAKIDALQKT 174
Query: 309 LEESRTLLEQADRARRQAEQELSDAH 386
+E + L+ +RA + AE+EL H
Sbjct: 175 NDEQKRKLQSTERALKVAEEELMRLH 200
>05_04_0081 + 17759158-17760021
Length = 287
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 187 NATRHKSRICRPL-SRRSSAPVTMPANSSASRSVAPMLFRTNW 312
N++ H S P +R+ APV + ++S +S RTNW
Sbjct: 134 NSSSHGSESSTPCPARQQEAPVNLESSSESSEDEVRRATRTNW 176
>04_01_0340 + 4435344-4435637
Length = 97
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 296 SSERTGRV-PHTLGAGRPRPSPGRAGTQRRPRATQRALRTERFPLCRQEETRVRAANP 466
SS GR P AGRP PSP AG AT L R + + V A P
Sbjct: 7 SSVTAGRPDPSPATAGRPDPSPATAGRPDSSPATAGRLDLSPATAGRPDSSPVTAGRP 64
>01_06_0513 - 29944888-29945943
Length = 351
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 311 GRVPHTLGAGR-PRPSPGRAGTQRRPRATQRALRTERFPLCRQEETR-VRAANPALRPRR 484
G P A P PSP +GT PR+ +R RT+R+ + R A A P
Sbjct: 33 GAAPAAAAAAELPSPSPSSSGTSPSPRSKRR--RTDRYAQGFEFAPRPAPATATATAPAP 90
Query: 485 TSQRG 499
T RG
Sbjct: 91 TPARG 95
>11_05_0075 +
18856659-18856878,18856890-18857107,18858253-18858319,
18858706-18859397
Length = 398
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 275 LGASRQCSSERTGRVPHTLGAGRPRPSPGRAGTQRRPRATQRALRTER 418
L ASR+ R R G G+ P P RA RR RA A R +R
Sbjct: 200 LRASRRLLRLRHPRFLPLRGGGQSDPRPCRASALRRKRAEGEAGRRQR 247
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 356 PGRAGTQRRPRATQRALRTERF---PLCRQEETRVRAANPAL-RPRRTSQR 496
P R G +RPR T+ + T RF + EE AN ++ RP RT+Q+
Sbjct: 118 PNRQGILKRPRQTEGSRITRRFSGKEIVPDEEDDGLEANVSVRRPVRTAQK 168
>04_04_0650 + 26950912-26951397,26951552-26951728
Length = 220
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 344 PRPSPGRAGTQRR-PRATQRALRTERFPLCRQEE 442
P SP + +RR PRAT A R+ RFP R ++
Sbjct: 7 PFLSPAKLSLERRLPRATWTARRSVRFPPVRAQD 40
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 278 GASRQCSSER-TGRVPHTLGAGRPRPS-PGRA 367
G SR+ E TGR TLG GRP P PGR+
Sbjct: 25 GLSRRFMPESATGREIVTLGEGRPAPDYPGRS 56
>08_01_0281 - 2290348-2290637,2290846-2291032
Length = 158
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 314 RVPHTLGAGRPRPSPGRAGTQRRPRATQRALRTERFPLCRQEETRVRAANPALRPRRTSQ 493
RV + LG G+ RP G RP +A+ + P R+ A P +RP R +
Sbjct: 78 RVDYRLGLGQRRPRRQHHG---RP---WQAIHPPQPPFAAAAHQRLPARKPHIRPLRHQR 131
Query: 494 RG 499
RG
Sbjct: 132 RG 133
>06_01_0919 -
7090494-7091219,7091630-7091763,7091860-7091927,
7092471-7092515,7092620-7092639,7092798-7092860,
7092946-7093115,7093216-7093252
Length = 420
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = +3
Query: 267 LGISERRANALQNELEESRTLLEQADRARRQAEQELSDAHEXXXXXXXXXXXXXXXXXXX 446
+ + + R + +++ + + LE A RAR AEQEL
Sbjct: 16 MSVLKLRLDGVRSAYDAAAAELETAKRAREDAEQELGGNQVQVAIAVVSIHGLEATISHL 75
Query: 447 XXELQTLHSDLDEL 488
E+ + SDLD L
Sbjct: 76 QEEISQVRSDLDAL 89
>08_02_0360 + 16196712-16197560,16198126-16198875
Length = 532
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 338 GRPRPSPGRAGTQRRPRATQRALRTERFPLCRQEETRVRAANPALRP 478
G +P PG RPR+ R+L T++R +PA RP
Sbjct: 303 GSAKPEPGVRPNPSRPRSVARSLSPRHV-----TRTKIRGDSPARRP 344
>06_01_0839 + 6365962-6366798
Length = 278
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 282 RRANALQNELEESRTLLEQADRARRQAEQELSDAHE 389
R N L +E+E ++ + ++ + +QE++D HE
Sbjct: 160 RDINLLDSEIELHEAIIAEREQGILEVQQEIADIHE 195
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/89 (23%), Positives = 33/89 (37%)
Frame = +3
Query: 120 INELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANAL 299
I EL ++ + E Q I+ ++ I L T + E + L
Sbjct: 630 IQELRDEINSLTDSRNELQNEIQSLRSTISQLNTEKDAALFQHQQSVERVSDLESQLLKL 689
Query: 300 QNELEESRTLLEQADRARRQAEQELSDAH 386
Q ELEE ++ + Q QE +AH
Sbjct: 690 QPELEEIEQKVQMLMQDLEQKRQEADNAH 718
>02_03_0070 - 14755864-14756157,14756853-14757011
Length = 150
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 326 TLGAGRPRPSPGRAGTQRRPRATQRALRTERFP 424
++G RPR +PG+ G Q + T A + + P
Sbjct: 17 SMGRPRPRSAPGKLGAQAKKPMTPAAKKPQATP 49
>02_02_0335 +
9063749-9064216,9064846-9064890,9065351-9065470,
9066025-9067527
Length = 711
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 120 INELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANAL 299
IN L++ L HA + E + + Y+ + L L ++ ++L
Sbjct: 265 INGLKLELQHAQEHIQELKCERRGYRHDVASLVRQLSEDKLVRKNKDKEKIAAD--IHSL 322
Query: 300 QNELEESRTLLEQADRARRQAEQELSD 380
Q+ELE+ R L ++ R+ +ELS+
Sbjct: 323 QDELEDERRLRRHSEDLHRKFGKELSE 349
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 27.1 bits (57), Expect = 8.9
Identities = 23/99 (23%), Positives = 35/99 (35%)
Frame = +3
Query: 30 RALDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIK 209
++LD M K LEA+ L AL K EA +N + Q I
Sbjct: 663 KSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKALAEQQKITTEAHENTEDAQNLIS 722
Query: 210 DLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRT 326
LQT L +++ L+ ++ SR+
Sbjct: 723 RLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRS 761
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.121 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,574,119
Number of Sequences: 37544
Number of extensions: 144677
Number of successful extensions: 906
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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