Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30134
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 35 0.002
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 31 0.023
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 28 0.16
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 23 8.1
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 23 8.1
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 23 8.1
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 23 8.1
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 8.1
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 34.7 bits (76), Expect = 0.002
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +3
Query: 99 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 278
+++L+ ++NEL A ++ E + + + Q +K LQ L +
Sbjct: 718 REQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEG 777
Query: 279 ERRANALQNELEESRTLLEQADRARRQAEQEL 374
E L+ ELE SRT+L + + + + +L
Sbjct: 778 ETEETTLREELEHSRTILAKLQKGIEEEQAKL 809
Score = 25.0 bits (52), Expect = 1.5
Identities = 18/93 (19%), Positives = 35/93 (37%)
Frame = +3
Query: 102 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISE 281
KKL I E E + + A+ I Y+A I+ + L +
Sbjct: 336 KKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEAYGTVRRTLQDVQ 395
Query: 282 RRANALQNELEESRTLLEQADRARRQAEQELSD 380
+ A++ + + + + + RQ EQ+L +
Sbjct: 396 AKQAAIERGMRNASERVTRIQKDARQIEQDLQE 428
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 31.1 bits (67), Expect = 0.023
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +3
Query: 105 KLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTA---LXXXXXXXXXXXXXLGI 275
+L+++IN+ ++ K +E + +KR + I ++T+ L +G
Sbjct: 416 RLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGT 475
Query: 276 SERRANALQNELEESRTLLEQA-----DRARRQAEQEL 374
S+ R + LQ+EL+ R L A + ARR+ +QE+
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEV 513
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 28.3 bits (60), Expect = 0.16
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 102 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 215
+ LEA + E + A D ++ QKN+ RY QI ++
Sbjct: 853 RALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEI 890
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 8.1
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 138 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 317
A +A++ AEA N+K+ Q K AL I++ ++ +E+ +
Sbjct: 55 ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111
Query: 318 SRTLLEQADRARRQAEQELSDAHE 389
+R E+ + + EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 8.1
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 138 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 317
A +A++ AEA N+K+ Q K AL I++ ++ +E+ +
Sbjct: 55 ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111
Query: 318 SRTLLEQADRARRQAEQELSDAHE 389
+R E+ + + EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 8.1
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 138 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 317
A +A++ AEA N+K+ Q K AL I++ ++ +E+ +
Sbjct: 55 ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111
Query: 318 SRTLLEQADRARRQAEQELSDAHE 389
+R E+ + + EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 8.1
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 138 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 317
A +A++ AEA N+K+ Q K AL I++ ++ +E+ +
Sbjct: 55 ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111
Query: 318 SRTLLEQADRARRQAEQELSDAHE 389
+R E+ + + EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 22.6 bits (46), Expect = 8.1
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 138 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 317
A +A++ AEA N+K+ Q K AL I++ ++ +E+ +
Sbjct: 1194 ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 1250
Query: 318 SRTLLEQADRARRQAEQELSDAHE 389
+R E+ + + EQ L+ A E
Sbjct: 1251 AR---EKLNTVSKLTEQALTRARE 1271
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.314 0.121 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,958
Number of Sequences: 2352
Number of extensions: 4433
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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