Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30133
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 34 0.003
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 29 0.093
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.28
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 27 0.38
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.50
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 26 0.66
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 26 0.66
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.1
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 1.5
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 25 2.0
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 4.6
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 4.6
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 6.1
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 8.1
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 33.9 bits (74), Expect = 0.003
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 EQQARDANLRAEKVNEEVRELQKK------LAQVEEDLILNKNKLEQANKDLEEKEKQLT 303
E+ L+ EK+ EE++E+ KK L VE + +N+L+ + DLE +K +
Sbjct: 681 EKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLETSKKNIN 740
Query: 304 ATEAEVAALNRE 339
+ ++ RE
Sbjct: 741 EYDRQLEDFTRE 752
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 29.1 bits (62), Expect = 0.093
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 100 KLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDL-ILNKNKLEQANKD 276
K + + + E+Q + L+ E NE+++E Q++ + ED + E+ K+
Sbjct: 79 KADNETTVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAEHREELRKE 138
Query: 277 LEEKEKQLTATEAEVAALNRESAAD*GRPREI 372
E L T + ES + R +E+
Sbjct: 139 KELFNALLAQTLGGTSGARLESQQELQREQEL 170
Score = 23.4 bits (48), Expect = 4.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 335 GKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLE 460
G V+++EE ++ + + ++L EAQ+ A E +V E
Sbjct: 87 GIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVRE 128
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.5 bits (58), Expect = 0.28
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 91 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN 270
+ MKLE+++ + E++AR+A A + E+ REL+++ + + + K + E+
Sbjct: 439 ERMKLEEEHRAARLRE-EERAREAREAAIE-REKERELREQREREQRE----KEQREKEQ 492
Query: 271 KDLEEKEKQLTATE-AEVAALNRESAAD*GRPRE 369
++ EE+E+Q E E +E + R RE
Sbjct: 493 REKEERERQQREKEQREREQREKEREREAARERE 526
Score = 24.2 bits (50), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 298 AASPSLQGPCWPAPACSCSGSGLPP 224
AA+P+ Q P PAPA + S +G+ P
Sbjct: 933 AAAPTQQQPLPPAPA-AASSAGVQP 956
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 27.1 bits (57), Expect = 0.38
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 169 RAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNR 336
R++K +EE R+ KK Q E L K ++E+ K + ++Q E ++AAL +
Sbjct: 798 RSKKKSEESRKNWKKHEQDFETL---KLEIEELQKGIVTAKEQAVKLEEQIAALQQ 850
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 100 KLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN--- 270
+L++ + M + + R A ++ EE+ EL KK+ +++ ++ + Q +
Sbjct: 712 QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV 771
Query: 271 KDLEEK 288
KDL+ K
Sbjct: 772 KDLQAK 777
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 26.6 bits (56), Expect = 0.50
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 157 DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNR 336
+AN R E++NEE+ +++ + + +E + +L EE EK A E + ALN+
Sbjct: 14 EANARNERINEELTQMRILMTKQQE--YTERRELIAR----EEMEKMRAAHERDRTALNK 67
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 26.2 bits (55), Expect = 0.66
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +1
Query: 148 QARDANLRA--EKVNEEVRELQKKLAQVEEDLILNK----NKLEQANKDLEEKEKQLTAT 309
QA+ A + +E V +QK Q+E+DL +++EQ + +E ++ QL
Sbjct: 395 QAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKER 454
Query: 310 EAEVAAL 330
E+A++
Sbjct: 455 NDELASM 461
Score = 25.8 bits (54), Expect = 0.87
Identities = 14/72 (19%), Positives = 29/72 (40%)
Frame = +1
Query: 124 DKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLT 303
D EQ+ + ++ E EL +A + ++ L N + EEK +
Sbjct: 432 DGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERC 491
Query: 304 ATEAEVAALNRE 339
A ++E + ++
Sbjct: 492 AKQSETTRIEKQ 503
Score = 25.0 bits (52), Expect = 1.5
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 142 EQQARDANLRAEKVNEE--VRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEA 315
E + + LR E + + +LQK + + + L + ++Q + + K+ + A EA
Sbjct: 776 EGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEA 835
Query: 316 EVAAL 330
E+A +
Sbjct: 836 EIARI 840
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.2 bits (55), Expect = 0.66
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +1
Query: 154 RDANLRAEKVNEEVRELQKKLAQVEEDL--ILNKNKLEQANKDLE----EKEKQLTATEA 315
R++ + EK++E +R ++ +L +EE+ + K ++A + LE E E + T +
Sbjct: 180 RESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQL 239
Query: 316 EVAALNRESAAD 351
E R+S+ D
Sbjct: 240 EELDGQRKSSGD 251
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 157 DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEK 294
DA+ + + +EL+K +++ +NK L+Q E+KEK
Sbjct: 953 DASYQKMSLKSLFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEK 998
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.4 bits (53), Expect = 1.1
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -3
Query: 289 PSLQGPCWPAPACSCSGSGLPPP--GRASSGVRGLPRLPSQHG 167
P L+GP P G G P P + G+ G+ LP +G
Sbjct: 331 PGLEGPSGPKGDAGVPGYGRPGPQGEKGDIGLTGVNGLPGLNG 373
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 332 TGKVQQIEEDLEKSEERSGTAQQKLLEAQQSADE 433
T ++ +EE E+ E+ +++L++A ADE
Sbjct: 293 TDEINSLEEKTERLEDTISKQKRELMDALAKADE 326
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.6 bits (51), Expect = 2.0
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 124 DKADTCEQQARDANLRAEK-VNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 300
+K D + A+ + EK +NE +REL+ +L +V++ L E N + +
Sbjct: 1082 EKIDILVEDAKSGSGVGEKTLNEILRELEARLQEVQKLLDNADQSQEVTNHKISKGGYNA 1141
Query: 301 TATEAEVAALNRE 339
T ++ R+
Sbjct: 1142 TLANGKIQDARRQ 1154
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.4 bits (48), Expect = 4.6
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -2
Query: 497 WSIRSLVXAVPCSPTLCTYGCSRQPTAGPRAASVGRCRTSP 375
WSI+S +P S + + R P++ V C P
Sbjct: 1427 WSIQSTTGDIPASKRMFAFVAKRSPSSADNQCHV-FCELEP 1466
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 4.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 192 SPRTPEEARPGGG 230
SP+ PEEA GGG
Sbjct: 901 SPKDPEEAAVGGG 913
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.0 bits (47), Expect = 6.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 338 KVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 457
++Q +EE L + TA+QKL Q++A+E + + L
Sbjct: 528 RLQTLEEALPVTRTELETAKQKL---QENANEERELTQTL 564
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 183 KRGSPRTPEEARPGGGRP 236
+ G+P P+ RPGG P
Sbjct: 202 RTGTPTQPQPPRPGGMYP 219
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,937
Number of Sequences: 2352
Number of extensions: 7990
Number of successful extensions: 54
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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