Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30132
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084119-1|AAL89857.1|  658|Drosophila melanogaster LD19039p pro...    29   2.8  
AE014135-21|AAN06552.1|  658|Drosophila melanogaster CG32000-PD,...    29   2.8  
AE014134-1301|AAF52533.1|  773|Drosophila melanogaster CG13792-P...    29   4.9  

>AY084119-1|AAL89857.1|  658|Drosophila melanogaster LD19039p
           protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 362 QKLIKHLHYIKFRTSKDDGDIDRDFP-IYRPNY*LNN*WLHCDTNLTYILQDT 207
           Q L  H+  +KFR S  + D D  FP I   N  L   W H   ++ Y+  ++
Sbjct: 19  QSLPNHIEDLKFRNSDVETDDDLHFPGIAAKNKILKLSWWHSPVDMHYVATES 71


>AE014135-21|AAN06552.1|  658|Drosophila melanogaster CG32000-PD,
           isoform D protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 362 QKLIKHLHYIKFRTSKDDGDIDRDFP-IYRPNY*LNN*WLHCDTNLTYILQDT 207
           Q L  H+  +KFR S  + D D  FP I   N  L   W H   ++ Y+  ++
Sbjct: 19  QSLPNHIEDLKFRNSDVETDDDLHFPGIAAKNKILKLSWWHSPVDMHYVATES 71


>AE014134-1301|AAF52533.1|  773|Drosophila melanogaster CG13792-PA
           protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/57 (22%), Positives = 35/57 (61%)
 Frame = -2

Query: 458 TPTKSSSAMKL*TLEIQLEPRFRSMTNKKKTSQKLIKHLHYIKFRTSKDDGDIDRDF 288
           +P+K S  +++ + + ++   F  M+ K+ + ++ +KH++ + FR+ +++  ID  F
Sbjct: 342 SPSKRSGMIEVFSQKYRVSS-FEDMSPKRTSDKQHLKHVNRLAFRSLEEERRIDNAF 397


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,656,460
Number of Sequences: 53049
Number of extensions: 317964
Number of successful extensions: 597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)