Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30128
         (401 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-P...    27   7.1  
BT016001-1|AAV36886.1|  454|Drosophila melanogaster RE40534p pro...    27   9.4  
AE013599-508|AAF59187.1|  454|Drosophila melanogaster CG1882-PA,...    27   9.4  

>AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-PA
           protein.
          Length = 266

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 303 VKWLLEPIDIYNVNAPPTLRYK 238
           + W+L  +D Y V +PP ++Y+
Sbjct: 239 IDWILMVVDNYTVRSPPKIQYR 260


>BT016001-1|AAV36886.1|  454|Drosophila melanogaster RE40534p
           protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 355 FFFFFCLCEWTSSQPT 308
           FF +  LC WTSS PT
Sbjct: 52  FFLWKWLCNWTSSSPT 67


>AE013599-508|AAF59187.1|  454|Drosophila melanogaster CG1882-PA,
           isoform A protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 355 FFFFFCLCEWTSSQPT 308
           FF +  LC WTSS PT
Sbjct: 52  FFLWKWLCNWTSSSPT 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,112,806
Number of Sequences: 53049
Number of extensions: 420256
Number of successful extensions: 1016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)