Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30120
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   0.84 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.84 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    24   0.84 
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   4.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 42  CTY*NVYNDFLM--RAFHTSKITVVVLINEQLQSI*SVTVYDRTILNSLET 188
           C +  +Y+D ++  + FH   + ++ ++   L+ + +VTV + TIL    T
Sbjct: 260 CIFGYIYDDEMVVPQNFHDIFLPLLCILTNTLEILITVTVCELTILEYKRT 310


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -1

Query: 174 SKSFYRTRLHFKLIVIVH*LRPRQ*FSMYGMLSSKSHCRRFNKYTVPINVLEVC 13
           SKSF+R  +H K++++         F+ Y ++ +  + RR   +T  +  LE C
Sbjct: 53  SKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRR--TWTRLLKNLESC 104


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 42  CTY*NVYNDFLM--RAFHTSKITVVVLINEQLQSI*SVTVYDRTILNSLET 188
           C +  +Y+D ++  + FH   + ++ ++   L+ + +VTV + TIL    T
Sbjct: 85  CIFGYIYDDEMVVPQNFHDIFLPLLCILTNTLEILITVTVCELTILEYKRT 135


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 94  DVWNALIKK 68
           DVWNAL+KK
Sbjct: 88  DVWNALVKK 96


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 98   FRCMECSHQK 69
            F+CM C+HQK
Sbjct: 1117 FKCMLCTHQK 1126


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 98   FRCMECSHQK 69
            F+CM C+HQK
Sbjct: 1117 FKCMLCTHQK 1126


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 98   FRCMECSHQK 69
            F+CM C+HQK
Sbjct: 1117 FKCMLCTHQK 1126


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 98   FRCMECSHQK 69
            F+CM C+HQK
Sbjct: 1117 FKCMLCTHQK 1126


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 36  EQCTY*NVYNDFLMRAFHTSKITVVVLIN 122
           E C   NVY   +    HTS   V+V I+
Sbjct: 52  ENCLVLNVYTRNIPDGIHTSLYPVLVWIH 80


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 244 NHLGHVTKVPLTRYSLLRHVSN 179
           N L  + KV +TR SLL+ + +
Sbjct: 150 NQLDALVKVEMTRVSLLQLIKS 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,025
Number of Sequences: 336
Number of extensions: 2228
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)