Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30120
         (486 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010014-1|AAQ22483.1| 1166|Drosophila melanogaster RE16941p pro...    28   7.8  
AE014134-2470|AAN10874.1| 1166|Drosophila melanogaster CG32972-P...    28   7.8  
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P...    28   7.8  

>BT010014-1|AAQ22483.1| 1166|Drosophila melanogaster RE16941p protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 404  LRWSRKNVHDQKWNEFKNRC*PSEVTMSNDRDIALFRG 291
            LR ++ N+HDQ+WN+         + + N +DI + +G
Sbjct: 978  LRVNQYNMHDQEWNDVTLTTINGAMVVLNKKDIKIPQG 1015


>AE014134-2470|AAN10874.1| 1166|Drosophila melanogaster CG32972-PB,
            isoform B protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 404  LRWSRKNVHDQKWNEFKNRC*PSEVTMSNDRDIALFRG 291
            LR ++ N+HDQ+WN+         + + N +DI + +G
Sbjct: 978  LRVNQYNMHDQEWNDVTLTTINGAMVVLNKKDIKIPQG 1015


>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
            isoform A protein.
          Length = 1853

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 404  LRWSRKNVHDQKWNEFKNRC*PSEVTMSNDRDIALFRG 291
            LR ++ N+HDQ+WN+         + + N +DI + +G
Sbjct: 978  LRVNQYNMHDQEWNDVTLTTINGAMVVLNKKDIKIPQG 1015


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,094,502
Number of Sequences: 53049
Number of extensions: 349774
Number of successful extensions: 508
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)