Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30120
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70035-11|CAA93872.1|  388|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z69383-10|CAM06587.1|  222|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z70035-11|CAA93872.1|  388|Caenorhabditis elegans Hypothetical
           protein R09D1.13 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 283 CVNTIHEIASYVANHLGHVTKVP-LTRYSLLRHV 185
           CV+ +H  A  +AN + ++T +P + R+  LR++
Sbjct: 200 CVSDLHSFAFQIANGMEYLTHIPVIHRFLALRNI 233


>Z69383-10|CAM06587.1|  222|Caenorhabditis elegans Hypothetical
           protein F13E9.14 protein.
          Length = 222

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 105 VVVLINEQLQSI*SVTVYDRTILNSLETCLNNE 203
           V   + E  Q++ SV     ++LNSLET L NE
Sbjct: 127 VTAKLEELKQNVTSVLTNLSSVLNSLETILENE 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,356,720
Number of Sequences: 27780
Number of extensions: 200607
Number of successful extensions: 345
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)