Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30115
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.9  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   8.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 245 LQITVSESHKRRRHVSPSTRGHNLNANIS 331
           L I  +E H   R + P  R   LN N+S
Sbjct: 326 LYIICNEGHHATRKMGPEFRERLLNVNLS 354


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 245 LQITVSESHKRRRHVSPSTRGHNLNANIS 331
           L I  +E H   R + P  R   LN N+S
Sbjct: 326 LYIICNEGHHATRKMGPEFRERLLNVNLS 354


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 100 VSN*FIIIIIYYPLRSMSQ*LSFNIFFGLLQRI 2
           VSN F  +  YYP+ +MS       FFG +Q I
Sbjct: 103 VSNVFDFVHFYYPVATMS--FYVLNFFGSIQFI 133


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 279 AATCPPVPED 308
           AA CPP P+D
Sbjct: 93  AANCPPSPKD 102


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 136 HSRHFCLQQFVKSYFQYVRTLYV 204
           +SR  C  QFV+S   Y+  +Y+
Sbjct: 54  YSRLACEIQFVRSMGYYLIQIYI 76


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 237 TAGYKSRFRRATNDAATCP 293
           T G + RFR   + A+ CP
Sbjct: 339 TPGRRYRFRMINSFASVCP 357


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 237 TAGYKSRFRRATNDAATCP 293
           T G + RFR   + A+ CP
Sbjct: 339 TPGRRYRFRMINSFASVCP 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,240
Number of Sequences: 336
Number of extensions: 1630
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)