Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30115
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 3.4
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 3.4
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 3.4
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 3.4
U40954-5|AAB52653.1| 121|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical protein
ZK1193.2 protein.
Length = 1250
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +1
Query: 142 RHFCLQQFVKSY-FQYVRTLYVTH*TS---QVHPFRRLVTNHGFGE--PQTTP 282
R C F+ Y FQ R +V + HPFRR T H GE PQ TP
Sbjct: 978 RDGCAYPFISEYTFQCYRNQFVVALDGLDFEGHPFRRTFTVHCDGEIRPQPTP 1030
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 896 RARNASPSAQPHNLSVAKSTSLASFD 921
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical protein
C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 1052 RARNASPSAQPHNLSVAKSTSLASFD 1077
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical protein
C06C3.1b protein.
Length = 1019
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 947 RARNASPSAQPHNLSVAKSTSLASFD 972
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical protein
C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 944 RARNASPSAQPHNLSVAKSTSLASFD 969
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 896 RARNASPSAQPHNLSVAKSTSLASFD 921
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 1052 RARNASPSAQPHNLSVAKSTSLASFD 1077
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical protein
C06C3.1b protein.
Length = 1019
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 947 RARNASPSAQPHNLSVAKSTSLASFD 972
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical protein
C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 944 RARNASPSAQPHNLSVAKSTSLASFD 969
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 275 RRRHVSPSTRGHNLNANISTSTIRFD 352
R R+ SPS + HNL+ STS FD
Sbjct: 944 RARNASPSAQPHNLSVAKSTSLASFD 969
>U40954-5|AAB52653.1| 121|Caenorhabditis elegans Hypothetical
protein ZK813.2 protein.
Length = 121
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 260 SESHKRRRHVSPSTRGHNLNAN 325
SESH+ RRH SP+ L AN
Sbjct: 85 SESHEGRRHSSPNPPNQQLPAN 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,309,092
Number of Sequences: 27780
Number of extensions: 148236
Number of successful extensions: 395
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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