Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30114
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 115 2e-26
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 107 4e-24
06_03_1473 - 30382528-30382731,30382814-30382930,30383048-303831... 80 9e-16
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 30 1.3
03_02_0663 + 10256898-10258915,10259162-10259248,10259463-102597... 29 2.9
01_05_0127 - 18401461-18401464,18401868-18403876,18404060-184042... 28 3.9
11_06_0370 + 22768977-22769523,22769619-22770642,22770784-227711... 28 5.1
08_02_0189 + 13984892-13984943,13985929-13986480,13986577-139867... 28 5.1
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 28 5.1
12_02_0586 + 20831933-20832378,20832434-20833031,20833813-208339... 27 8.9
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 27 8.9
07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415... 27 8.9
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 27 8.9
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 115 bits (277), Expect = 2e-26
Identities = 50/121 (41%), Positives = 77/121 (63%)
Frame = +1
Query: 124 PVPDLEKLLERDGYLKPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQD 303
P D +K+ + D L Y+ + RY+ Y+ + I+ ++GGLE F++GY+ +G + +
Sbjct: 140 PTGDGQKIFQMDSMLNGYKYHLEYRYSLYRRLRSDIDQYEGGLETFSRGYEKFGFNHSAE 199
Query: 304 GSVTWREWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQ 483
G VT+REWAPGAHS L G+FN W+ + +K E+G WEI +P N DGS + H SRV+
Sbjct: 200 G-VTYREWAPGAHSAALVGDFNNWNPNADRMSKNEFGVWEIFLPNNADGSSPIPHGSRVK 258
Query: 484 I 486
+
Sbjct: 259 V 259
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 107 bits (258), Expect = 4e-24
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +1
Query: 112 PMEVPVP-DLEKLLERDGYLKPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGP 288
P +P P D +K+ + D L+ + + RY+ YK + I+ +GGL+AF++GY+ G
Sbjct: 150 PRVIPPPGDGQKIYQIDPMLEGFRNHLDYRYSEYKRMRAAIDQHEGGLDAFSRGYEKLGF 209
Query: 289 QFNQDGSVTWREWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKH 468
+ +G +T+REWAPGA S L G+FN W+ + + EYG WEI +P N DGS A+ H
Sbjct: 210 TRSAEG-ITYREWAPGAQSAALVGDFNNWNPNADTMTRNEYGVWEISLPNNADGSPAIPH 268
Query: 469 DSRVQI 486
SRV+I
Sbjct: 269 GSRVKI 274
>06_03_1473 -
30382528-30382731,30382814-30382930,30383048-30383129,
30383211-30383278,30383444-30383545,30383994-30384122,
30384561-30384623,30384781-30384897,30385210-30386116,
30386225-30386494,30386929-30386998,30387114-30387273
Length = 762
Score = 80.2 bits (189), Expect = 9e-16
Identities = 41/113 (36%), Positives = 62/113 (54%)
Frame = +1
Query: 145 LLERDGYLKPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQDGSVTWRE 324
+ + D L+ ++ R Y D IE +GGLE F+KGY +G DG+ +RE
Sbjct: 13 IYDLDPKLEEFKDHFNYRIKRYLDQKCLIEKHEGGLEEFSKGYLKFGIN-TVDGATIYRE 71
Query: 325 WAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQ 483
WAP A L GEFN W+ H K ++G W I+I ++ +G A+ H+S+V+
Sbjct: 72 WAPAAQEAQLIGEFNNWNGAKHKMEKDKFGIWSIKI-SHVNGKPAIPHNSKVK 123
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 169 KPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQDGSVTWREWAPGAH 342
+ + + +R RY KD + S L+ + G++ G ++ V + EWAPG H
Sbjct: 91 RAFAQFLRDRYKALKDRRWELHSRLIDLKEASSGFELMGMHRHRQHRVDFMEWAPGHH 148
>03_02_0663 +
10256898-10258915,10259162-10259248,10259463-10259724,
10259802-10260111,10260535-10260645,10260861-10261090
Length = 1005
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 45 NCICKYIHNYLQYNGW*LFSYGSDGSACTRFREIIRKRRLFEA 173
NC + H L Y GW L+ G A + + I+ +R FEA
Sbjct: 708 NCSA-HEHERLVYEGWILYDTGHRDEALAKAEQSIKIQRSFEA 749
>01_05_0127 -
18401461-18401464,18401868-18403876,18404060-18404237,
18404381-18404958,18405609-18405611
Length = 923
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +1
Query: 205 CYKDIWDRIESWDG-GLEA 258
C KD+WD++E W+G G+EA
Sbjct: 882 CEKDVWDKLE-WNGDGMEA 899
>11_06_0370 +
22768977-22769523,22769619-22770642,22770784-22771170,
22771216-22771507
Length = 749
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 31 FYSSPTVYVNIYITTYNIMGGNYSAMDPMEVPV--PDLEKLLERDGYL 168
+YS P++ ++ Y + G + E+ + PDLE+LLE G L
Sbjct: 679 YYSGPSIMWDVAGDRYELFDGGADFLQQAELTLDEPDLERLLEDLGAL 726
>08_02_0189 +
13984892-13984943,13985929-13986480,13986577-13986759,
13986826-13987006,13987238-13987654,13987742-13988128,
13988176-13988467
Length = 687
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 31 FYSSPTVYVNIYITTYNIMGGNYSAMDPMEVPV--PDLEKLLERDGYL 168
+YS P++ ++ Y + G + E+ + PDLE+LLE G L
Sbjct: 617 YYSGPSIMWDVAGDRYELFDGGADFLQQAELTLDEPDLERLLEDLGAL 664
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +2
Query: 212 KTFGTVSNHGTVA*KHSRRATNTTDPNLIRMAPLRGASGLQERIAYIFEVNSMDGTRRAI 391
K+ TVS G + +HS+ +N+ + N++ + + Q + + N ++ I
Sbjct: 557 KSKETVSPRGRLRSRHSQTKSNSDNDNVLHIPETKINLAKQIDVGVVDHPNPLNANSPYI 616
Query: 392 HSLKRSTANGRFKSPQI 442
H K ++ R + P I
Sbjct: 617 HQSKIASTPNREEMPTI 633
>12_02_0586 +
20831933-20832378,20832434-20833031,20833813-20833986,
20834208-20834570
Length = 526
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 190 RRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQDGSVTWREWAP 333
R YK D + D G+ F + Y GP++++ G EW P
Sbjct: 464 RMTVTIYKQYEDA-KDLDLGILGFRGRWSYSGPEYHRSGFSVRYEWTP 510
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 123 ACTRFREIIRKRRLFEAIRKRN*KEICLLQRHLGPYRIMGR 245
AC RF E+ + + +RK E+ +QR P+ + GR
Sbjct: 78 ACARFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGR 118
>07_01_0559 +
4151054-4151178,4151306-4153018,4153121-4153412,
4154327-4154636,4155041-4155261
Length = 886
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 66 HNYLQYNGW*LFSYGSDGSACTRFREIIRKRRLFEA 173
H L Y GW L+ G A + E I +R FEA
Sbjct: 635 HERLVYEGWLLYDTGHCEEALQKAEESISIQRSFEA 670
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 373 WDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRV 480
WD +++P YG++ +Q P +HD +V
Sbjct: 490 WDWRANPQLNMGYGQYNMQYPVGAANFIVQQHDVKV 525
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,882,577
Number of Sequences: 37544
Number of extensions: 365719
Number of successful extensions: 792
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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