Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30114
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...   118   2e-27
Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical pr...    52   3e-07
L12018-9|AAA65465.2|  243|Caenorhabditis elegans Hypothetical pr...    31   0.65 
AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical ...    30   1.1  
AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family ...    29   2.6  
Z66524-8|CAH10782.1|  753|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z66523-10|CAH04723.1|  753|Caenorhabditis elegans Hypothetical p...    28   3.4  
U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z81569-1|CAB04601.2|  151|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U13070-10|AAC46644.3|  294|Caenorhabditis elegans Hypothetical p...    27   6.0  
U13070-9|AAU05578.1|  388|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U13070-8|AAN84828.1|  433|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AB079783-1|BAB84821.1|  433|Caenorhabditis elegans endo-beta-N-a...    27   6.0  

>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score =  118 bits (284), Expect = 2e-27
 Identities = 54/122 (44%), Positives = 75/122 (61%)
 Frame = +1

Query: 130 PDLEKLLERDGYLKPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQDGS 309
           P +++LL+ D YL  ++ EI RRY  + D   RIE   GG+E FT  YK +G     D S
Sbjct: 7   PKIDELLKIDPYLHDFQDEISRRYGVFLDYQRRIEEC-GGMEEFTSSYKQFGLNVQPDNS 65

Query: 310 VTWREWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQII 489
           V   EWAP A  L L G+FN WD  ++ + K+E+GKW I +PA  DGSC + H+S ++I 
Sbjct: 66  VKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKWSITVPAKEDGSCPIPHNSVIKIA 125

Query: 490 VN 495
           V+
Sbjct: 126 VS 127


>Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical
           protein T04A8.7b protein.
          Length = 606

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = +1

Query: 367 NGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQIIVN 495
           + WD  ++ + K+E+GKW I +PA  DGSC + H+S ++I V+
Sbjct: 10  DNWDQNANVYKKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVS 52


>L12018-9|AAA65465.2|  243|Caenorhabditis elegans Hypothetical
           protein F22B7.9 protein.
          Length = 243

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 63  IHNYLQYNGW*LFS----YGSDGSACTRFREIIRKRRLFEAIRK 182
           +H  L Y+G  LFS    Y +   + T F +++++RR FEAI +
Sbjct: 179 LHQGLSYDGICLFSCRTHYANVDGSLTAFLQLVKRRREFEAIER 222


>AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical
           protein T27B7.2 protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 455 HEPSGFAGI*ISHLPYSFLANGWLFESHPLNSPRRCRLCAPGAHSRH 315
           H  S  +   + +L Y F  +  L +    NSP  CR+C   AH  H
Sbjct: 9   HRDSKLSPFSLLYLFYQFPKHSALHKPAMTNSPFSCRICGMKAHGTH 55


>AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family
           protein 32 protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 79  NIMGGNYSAMDPMEVPVPDLEKLLERDGY 165
           N  GG+Y      E+P+ D E+++  DGY
Sbjct: 79  NFNGGDYYPHKNSEIPMEDTEEIVHLDGY 107


>Z66524-8|CAH10782.1|  753|Caenorhabditis elegans Hypothetical
           protein T13H5.1b protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 159 RLFEAIRKRN*KEICLLQRHLGPYRIMGRWL-RSIHE 266
           +L E+ +K+N    CLL+ H+     + +W+ R+IHE
Sbjct: 29  QLKESKKKKNRASRCLLRIHISILNSLSKWIDRNIHE 65


>Z66523-10|CAH04723.1|  753|Caenorhabditis elegans Hypothetical
           protein T13H5.1b protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 159 RLFEAIRKRN*KEICLLQRHLGPYRIMGRWL-RSIHE 266
           +L E+ +K+N    CLL+ H+     + +W+ R+IHE
Sbjct: 29  QLKESKKKKNRASRCLLRIHISILNSLSKWIDRNIHE 65


>U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical
           protein C41G11.4c protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 223 PKCLCSKHISF*FLFRMASNN-RLFLIISLNLVQALPS 113
           P C C+ HI   F +   +NN   F I S  +VQ LP+
Sbjct: 511 PVCQCTGHIQCSFKYYFITNNYSSFSIFSYYIVQFLPT 548


>Z81569-1|CAB04601.2|  151|Caenorhabditis elegans Hypothetical
           protein K11B4.2 protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 371 DGTRRAIHSLKRSTANGRFKSPQIQMVRVH 460
           D TR+A  S + ST  GR KS      RVH
Sbjct: 112 DSTRKATSSAESSTVKGRSKSLHNVATRVH 141


>U13070-10|AAC46644.3|  294|Caenorhabditis elegans Hypothetical
           protein F01F1.10a protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 485 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 369
           +W R      H    FA   + H+  +  A GW++E  P
Sbjct: 246 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 284


>U13070-9|AAU05578.1|  388|Caenorhabditis elegans Hypothetical
           protein F01F1.10c protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 485 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 369
           +W R      H    FA   + H+  +  A GW++E  P
Sbjct: 201 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 239


>U13070-8|AAN84828.1|  433|Caenorhabditis elegans Hypothetical
           protein F01F1.10b protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 485 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 369
           +W R      H    FA   + H+  +  A GW++E  P
Sbjct: 246 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 284


>AB079783-1|BAB84821.1|  433|Caenorhabditis elegans
           endo-beta-N-acetylglucosaminidase protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 485 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 369
           +W R      H    FA   + H+  +  A GW++E  P
Sbjct: 246 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 284


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,219,183
Number of Sequences: 27780
Number of extensions: 297629
Number of successful extensions: 733
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)