Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30111
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7K3N4 Cluster: GH26015p; n=2; Sophophora|Rep: GH26015p...    58   2e-07
UniRef50_Q16M72 Cluster: Hydroxybutyrate dehydrogenase; n=4; End...    54   2e-06
UniRef50_A7PM46 Cluster: Chromosome chr14 scaffold_21, whole gen...    36   0.55 
UniRef50_A5ZU94 Cluster: Putative uncharacterized protein; n=1; ...    35   0.96 
UniRef50_Q8ILR5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  

>UniRef50_Q7K3N4 Cluster: GH26015p; n=2; Sophophora|Rep: GH26015p -
           Drosophila melanogaster (Fruit fly)
          Length = 388

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = +2

Query: 5   DGVTRTFPLSRYTPVSPREKLKSLLAEHMPRSLYEGLYTD*KIF 136
           D VTRTFP++RYTPV+  E+L+  LAEH+  SLYE LY + K F
Sbjct: 343 DAVTRTFPMARYTPVTSSERLQIFLAEHLAPSLYESLYGEQKKF 386


>UniRef50_Q16M72 Cluster: Hydroxybutyrate dehydrogenase; n=4;
           Endopterygota|Rep: Hydroxybutyrate dehydrogenase - Aedes
           aegypti (Yellowfever mosquito)
          Length = 302

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 21/41 (51%), Positives = 34/41 (82%)
 Frame = +2

Query: 2   SDGVTRTFPLSRYTPVSPREKLKSLLAEHMPRSLYEGLYTD 124
           +D + R+FPL RYTP+S  EKL+++++EH+PRS+YE  Y++
Sbjct: 262 TDAIIRSFPLFRYTPLSRYEKLQTIVSEHLPRSVYELFYSN 302


>UniRef50_A7PM46 Cluster: Chromosome chr14 scaffold_21, whole genome
            shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
            chr14 scaffold_21, whole genome shotgun sequence - Vitis
            vinifera (Grape)
          Length = 1752

 Score = 35.9 bits (79), Expect = 0.55
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 10   CDTYVPAVSLHAGLSKGETEVSTRRAHATLPLRRSIHRLKNILLKFLQCQ 159
            C ++ P    + G+SKG  EV TR  +A + +  S+   +NILL  L  Q
Sbjct: 851  CLSFTPKGVSYQGVSKGSQEVHTRYENAVVEIAASLQLSRNILLALLSLQ 900


>UniRef50_A5ZU94 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 208

 Score = 35.1 bits (77), Expect = 0.96
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = +2

Query: 293 LTMNIFLMSNFTRNNLSKLRS*VSKCFIDENFNKP 397
           +++++ +M+ FT  +LSK+RS   K F+ ENF KP
Sbjct: 147 VSVSVIMMAAFTTGSLSKVRSKSRKVFVFENFPKP 181


>UniRef50_Q8ILR5 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 3597

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
 Frame = -1

Query: 396  GLLKFSSMKHLLTHERSFDKLFL--VKFDI-KKMFIVN*YDTVRNADYPYSFFLL*NIDV 226
            G+L F +   ++T +   + L L  V F+I +KMF+ N    +  + Y Y  F L +ID 
Sbjct: 3187 GILGFMA-NSIVTRDNMNNSLILPYVDFEINEKMFLQNILYHINISPYLYKLFELTHIDK 3245

Query: 225  KIGVKKSKLKYFS*VARYSCL 163
            K    K KLK  + VA   CL
Sbjct: 3246 KCNTYKKKLK--NSVAHIQCL 3264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,322,770
Number of Sequences: 1657284
Number of extensions: 8104464
Number of successful extensions: 17195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17193
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)