Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30109
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 244 7e-64
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 244 9e-64
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 243 2e-63
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 203 2e-51
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 197 1e-49
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 182 3e-45
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 176 3e-43
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 169 2e-41
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 3e-38
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 151 9e-36
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 141 1e-32
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 126 2e-28
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 2e-25
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 107 1e-22
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 90 2e-17
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 87 2e-16
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 87 3e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 9e-16
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 71 1e-11
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 69 6e-11
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 67 2e-10
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 60 3e-08
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 59 5e-08
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 59 5e-08
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 56 4e-07
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 3e-06
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.18
UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5; Bacteri... 38 0.18
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.41
UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4; Bacteri... 36 0.41
UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7; Haloba... 36 0.72
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 35 0.96
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 2.2
UniRef50_UPI000023D25B Cluster: hypothetical protein FG06262.1; ... 33 2.9
UniRef50_Q23KL5 Cluster: Protein kinase domain containing protei... 33 3.9
UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.... 33 5.1
UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice ... 32 6.8
UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12; Alphap... 32 6.8
UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whol... 32 8.9
UniRef50_Q1ZDC0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, who... 32 8.9
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 244 bits (598), Expect = 7e-64
Identities = 113/139 (81%), Positives = 131/139 (94%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 277
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 278 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRS 457
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 458 MARXLSGSVKEILGTAQSV 514
+AR LSG++KEILGTAQSV
Sbjct: 121 LARELSGTIKEILGTAQSV 139
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 244 bits (597), Expect = 9e-64
Identities = 114/139 (82%), Positives = 128/139 (92%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 277
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 278 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRS 457
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++ IA++MR RS
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 262
Query: 458 MARXLSGSVKEILGTAQSV 514
MAR L G+ KE+LGTAQSV
Sbjct: 263 MARELKGTCKEVLGTAQSV 281
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 243 bits (594), Expect = 2e-63
Identities = 112/139 (80%), Positives = 130/139 (93%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 277
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 278 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRS 457
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ I + MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 458 MARXLSGSVKEILGTAQSV 514
+AR LSG++KEILGTAQSV
Sbjct: 153 LARELSGTIKEILGTAQSV 171
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 203 bits (495), Expect = 2e-51
Identities = 96/141 (68%), Positives = 121/141 (85%), Gaps = 1/141 (0%)
Frame = +2
Query: 95 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 271
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 272 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRN 451
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+D+I +A++MR
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
Query: 452 RSMARXLSGSVKEILGTAQSV 514
+S A+ L+G+VKEILGTA+SV
Sbjct: 182 KSCAKNLAGTVKEILGTAKSV 202
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 197 bits (480), Expect = 1e-49
Identities = 99/163 (60%), Positives = 125/163 (76%), Gaps = 24/163 (14%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 256
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 257 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 385
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 386 NIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEILGTAQSV 514
NIKHN +I L+D+I IA+ MR+RS+A+ L G+V EILGTA SV
Sbjct: 121 NIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSV 163
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 182 bits (444), Expect = 3e-45
Identities = 86/140 (61%), Positives = 107/140 (76%)
Frame = +2
Query: 95 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 274
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 275 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNR 454
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ +++ IAK
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPN 174
Query: 455 SMARXLSGSVKEILGTAQSV 514
SM + V E+LGTA S+
Sbjct: 175 SMGASMKSVVMEVLGTAVSI 194
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 176 bits (428), Expect = 3e-43
Identities = 80/127 (62%), Positives = 103/127 (81%)
Frame = +2
Query: 134 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 313
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 314 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEI 493
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA+ M+ +S A+ G+VKEI
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEI 144
Query: 494 LGTAQSV 514
LGT S+
Sbjct: 145 LGTCNSI 151
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 169 bits (412), Expect = 2e-41
Identities = 71/139 (51%), Positives = 107/139 (76%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 277
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 278 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRS 457
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE VI +A+ + +S
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKS 120
Query: 458 MARXLSGSVKEILGTAQSV 514
+A+ +G+VK++LGTAQS+
Sbjct: 121 LAKTFTGTVKQVLGTAQSL 139
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 3e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +2
Query: 134 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 313
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 314 VVPSAAALIIRALKEPPRDRKKQKN 388
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 151 bits (366), Expect = 9e-36
Identities = 77/136 (56%), Positives = 106/136 (77%), Gaps = 2/136 (1%)
Frame = +2
Query: 113 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 289
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 290 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMR-NRSMAR 466
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ + +V+ IA+I R +RS +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 467 XLSGSVKEILGTAQSV 514
LSG+VKE+LGT +S+
Sbjct: 125 SLSGTVKEVLGTCKSI 140
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 141 bits (341), Expect = 1e-32
Identities = 79/137 (57%), Positives = 96/137 (70%)
Frame = +2
Query: 104 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 283
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 284 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMA 463
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLD 225
Query: 464 RXLSGSVKEILGTAQSV 514
R LSG++KE+LGTAQS+
Sbjct: 226 RELSGTIKELLGTAQSL 242
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 126 bits (305), Expect = 2e-28
Identities = 60/139 (43%), Positives = 94/139 (67%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 277
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 278 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRS 457
++ +NRQ ++VVP+A++L+++AL E PR K + + H G + + V+ IAK +R S
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRANS 120
Query: 458 MARXLSGSVKEILGTAQSV 514
A +G+V E+LG+A+SV
Sbjct: 121 FALKYAGTVLEVLGSARSV 139
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 2e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -1
Query: 408 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 229
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 228 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 112
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 107 bits (258), Expect = 1e-22
Identities = 58/133 (43%), Positives = 82/133 (61%)
Frame = -3
Query: 496 KNLFY*ARKVPGH*SVSHDLRNSDYILKGDVAVVFDIFLLFTITRRLLKGSDDKGCCRGN 317
++LF +R+ G V H N D ++KGDV+ V +FLL +++ L+G DD+G R
Sbjct: 17 QDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRY 76
Query: 316 NSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQI 137
+ L LSVL+ Q HSD +TLP+T LG+VI HLF RQT+ + GQ GTD P Q+
Sbjct: 77 HLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQV 136
Query: 136 HDFNFIWVKLRGH 98
HDF+ + V+L H
Sbjct: 137 HDFDLVGVELGWH 149
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 90.2 bits (214), Expect = 2e-17
Identities = 40/56 (71%), Positives = 51/56 (91%)
Frame = +2
Query: 347 ALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEILGTAQSV 514
A KEPPRDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSV
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSV 229
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 87.0 bits (206), Expect = 2e-16
Identities = 46/119 (38%), Positives = 71/119 (59%)
Frame = -3
Query: 448 SHDLRNSDYILKGDVAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSD 269
SH L N D + + V VFD+ +L +++ L+ D++ NN LSVL+ QL+S+
Sbjct: 64 SHLLSNFDDVFQLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSN 123
Query: 268 LETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 92
L+TL + GLG++ T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 124 LDTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 86.6 bits (205), Expect = 3e-16
Identities = 46/130 (35%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Frame = +2
Query: 128 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLTVQNRQA 304
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 305 QIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSV 484
+ +VPS ++L+ R ++ + ++ + +I I+K ++ +S ++ G V
Sbjct: 67 YLKIVPSVSSLLKREMQLYGKPSV----------LTFKQLIKISKKVQTKSYSKAFKGVV 116
Query: 485 KEILGTAQSV 514
KE+LGT S+
Sbjct: 117 KEVLGTCCSM 126
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 9e-16
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +2
Query: 131 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 286
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 71.3 bits (167), Expect = 1e-11
Identities = 43/132 (32%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +2
Query: 128 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 301
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 302 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSG 478
+I V +P ALI + L + + + GN++LE VI IAK+ ++ ++ L
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKN 121
Query: 479 SVKEILGTAQSV 514
+VKE+LGT S+
Sbjct: 122 AVKEVLGTCGSM 133
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 68.9 bits (161), Expect = 6e-11
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +2
Query: 386 NIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEILGTAQSV 514
++KHNGNI+L+DV +AK+MR RSMAR LSG+VKEILGT QSV
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSV 109
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 98 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 208
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 67.3 bits (157), Expect = 2e-10
Identities = 40/132 (30%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +2
Query: 128 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 301
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 302 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSG 478
++ V +P A+ALI + + ++ + + GNI++E ++ IAK+ ++ +A L
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 479 SVKEILGTAQSV 514
+ KE++GT SV
Sbjct: 122 ASKEVVGTCVSV 133
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = +2
Query: 374 KKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEILGTAQSV 514
K QK+IKH+G+IS ++ + MR+RS+AR LSG++KEILGT+QSV
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSV 116
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 59.3 bits (137), Expect = 5e-08
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = +2
Query: 128 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI--TVQLTVQNRQ 301
K + + GG L P + LGL+ ++V I T+ +KG+ + T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 302 AQIAV-VPSAAALIIRALK-EPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLS 475
I V VP+ +L+++A+ + P K I GN+ LE + IA + + A+ L+
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI---GNLDLEQIADIAIKKKPQLSAKTLT 120
Query: 476 GSVKEILGTAQSV 514
++K +LGTA+S+
Sbjct: 121 AAIKSLLGTARSI 133
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 59.3 bits (137), Expect = 5e-08
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Frame = +2
Query: 134 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQ 307
+ L GG+ + P + P ++P KV +I K T +++GL + V++ + + ++ +
Sbjct: 6 IRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYK 65
Query: 308 IAV-VPSAAALIIRALKEPPRDRKKQKNIKH-NGNISLEDVIGIAKIMRNRSMARXLSGS 481
I V +P +AL+++A R Q+ + GN+S++DV+ IAK + L +
Sbjct: 66 IIVGLPPTSALLMKAAGVT---RGPQRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAA 122
Query: 482 VKEILGTAQS 511
VK +LGTA++
Sbjct: 123 VKSVLGTARA 132
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 56.4 bits (130), Expect = 4e-07
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Frame = +2
Query: 152 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 319
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 320 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEILG 499
P +AL+ + L KK++ + GN +LE + +A +A+ L +V E+LG
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLG 128
Query: 500 T 502
T
Sbjct: 129 T 129
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 3e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2
Query: 260 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 159
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.18
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +2
Query: 134 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 283
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 284 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 376
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5;
Bacteria|Rep: 50S ribosomal protein L11 - Treponema
pallidum
Length = 146
Score = 37.5 bits (83), Expect = 0.18
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +2
Query: 134 VNLRCVGGEVGATSSLAPKIGPLGLS-PKKVGDDIAKATSDWKGLKITVQLTVQNRQAQI 310
+ L+C G+ + P +GP G+S P+ V + S GL + V +TV + ++
Sbjct: 11 IKLQCPAGKATPAPPVGPALGPHGVSAPQFVQQFNDRTKSMEPGLVVPVVVTVYSDKSFS 70
Query: 311 AVV--PSAAALIIRA--LKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSG 478
V+ P AA LI +A +++ + KQK + +SL + IA++ A L
Sbjct: 71 FVLKTPPAAVLIRKACGIEKGSTNSVKQKVAR----LSLAQLTEIAQVKLPDMSALTLDA 126
Query: 479 SVKEILGTAQSV 514
+ + I GTA+S+
Sbjct: 127 AKRIIAGTARSM 138
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.3 bits (80), Expect = 0.41
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -3
Query: 409 DVAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 248
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4;
Bacteria|Rep: 50S ribosomal protein L11 - Blochmannia
floridanus
Length = 146
Score = 36.3 bits (80), Expect = 0.41
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +2
Query: 179 LAPKIGPLGLSPKKVGDDIAKATSDWK-GLKITVQLTVQ-NRQAQIAVVPSAAALIIRAL 352
+ P +G G++ K D T+D++ GL + V +TV +R + A +++
Sbjct: 26 IGPALGQQGINIMKFCKDFNTRTADFEMGLILPVVITVYVDRSFSFVIKTPTAVFLLKKA 85
Query: 353 KEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVKEILGTAQSV 514
+K K + G + + + IAKI + L + K I+GTA+S+
Sbjct: 86 AGIKSGSEKPKCVSV-GKVLISQIYEIAKIKLIDMTSLNLESASKSIMGTARSI 138
>UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7;
Halobacteriaceae|Rep: 50S ribosomal protein L11P -
Halobacterium salinarium (Halobacterium halobium)
Length = 163
Score = 35.5 bits (78), Expect = 0.72
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 134 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQA-QI 310
+ + GG+ L P++GP + + V +I T + G ++ V + ++ + I
Sbjct: 5 IEVLVAGGQADPGPPLGPELGPTPVDVQAVVQEINDQTEAFDGTEVPVTIEYEDDGSFSI 64
Query: 311 AV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSVK 487
V VP AAL+ + Q+N ++S+E + IA+ + +A + K
Sbjct: 65 EVGVPPTAALVKDEAGFDTGSGEPQENFV--ADLSIEQLKTIAEQKKPDLLAYDARNAAK 122
Query: 488 EILGTAQSV 514
E+ GT S+
Sbjct: 123 EVAGTCASL 131
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 35.1 bits (77), Expect = 0.96
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -1
Query: 462 AIDLFLMIFAIPITSSREMLPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACLF* 289
A LM+ P TS +L L +F C G A + R A +GT TA CLF
Sbjct: 277 AASSILMVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFF 336
Query: 288 TVSCTVILRPFQSLVALAMSS 226
T V+ P +++ A+ +
Sbjct: 337 TYIGVVVSAPLFGVLSTALGN 357
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 2.2
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 209 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 388
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 389 IKHNGNI 409
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_UPI000023D25B Cluster: hypothetical protein FG06262.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06262.1 - Gibberella zeae PH-1
Length = 441
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 341 IRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSV 484
++ + PPR R+K +N K N +D G++K +R R GS+
Sbjct: 293 VQEVNTPPRKRRKSRNSKDAPNDETQDEAGVSKPVRRRKPKAERVGSI 340
>UniRef50_Q23KL5 Cluster: Protein kinase domain containing protein;
n=3; Oligohymenophorea|Rep: Protein kinase domain
containing protein - Tetrahymena thermophila SB210
Length = 629
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 365 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGS 481
RD K +KHNGNI + D G AK++ N ++ + GS
Sbjct: 161 RDFKLANILKHNGNIKIAD-FGFAKLLGNDNLTSTMLGS 198
>UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.
CcI3|Rep: Ribosomal protein L11 - Frankia sp. (strain
CcI3)
Length = 165
Score = 32.7 bits (71), Expect = 5.1
Identities = 25/130 (19%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = +2
Query: 131 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQ 307
+V ++ GG + + +G G++ V + +A++ GL+++ +++ ++R +
Sbjct: 33 VVRIQQEGGNANV-AKIGQALGTYGVNIVGVMKEFNEASAIHHGLQVSADVSIFEDRSFE 91
Query: 308 IAVV-PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARXLSGSV 484
++V P+ +L+++A R + + +H G +++ + IAK+ + +
Sbjct: 92 LSVKSPATTSLLLQAAGV--RKGSPRPHAEHAGAVTVSQLREIAKVKLPDLNVDSMEAAE 149
Query: 485 KEILGTAQSV 514
K + GTA+S+
Sbjct: 150 KIVAGTARSM 159
>UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice
Isoform 2 of Nesprin 2; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Splice Isoform 2 of Nesprin 2 -
Takifugu rubripes
Length = 4795
Score = 32.3 bits (70), Expect = 6.8
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +2
Query: 143 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVP 322
R G+V S +GP+ + P+ ++ S GL +T L +N+ A+++
Sbjct: 2236 RSKNGQVSIISETVQHLGPVNVEPQPSKKEVNSQNSSNTGLAVTAALVEENK-AKLSPTQ 2294
Query: 323 SAAALIIRALKEPPRDRKK--QKNIKHNG-NISLEDVIGIAKIMRNRSMA 463
+ + K PP K K IK G SLE G +R RS A
Sbjct: 2295 RKS----KGPKHPPEPATKGNGKAIKEAGRQQSLEKTEGKLTPLRRRSKA 2340
>UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12;
Alphaproteobacteria|Rep: 30S ribosomal protein S20 -
Bradyrhizobium japonicum
Length = 88
Score = 32.3 bits (70), Expect = 6.8
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 209 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 388
S KK IA+ T+ K + ++ V+N + I AAA+ A EP R Q+N
Sbjct: 6 SAKKATRKIARRTAVNKSRRTQMRGAVRNVEEAIKTGDRAAAVKALANAEPALMRAAQRN 65
Query: 389 IKHNGNIS 412
I H N S
Sbjct: 66 IIHKNNAS 73
>UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10201, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 990
Score = 31.9 bits (69), Expect = 8.9
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 143 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVP 322
RC G +G SSL P P K+ G +A D GLK + + +
Sbjct: 125 RCAGEALGK-SSLLPV--PYDAILKEPGCVVAHGLPDGVGLKKPCEYDTRTLMKILEQSH 181
Query: 323 SAAALIIRALKEPPRDRKKQKNIKHN 400
+ R ++PPRD K ++ HN
Sbjct: 182 RIQFSVTRPAEDPPRDAKTSADLNHN 207
>UniRef50_Q1ZDC0 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 160
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +2
Query: 269 ITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMR 448
+ V +T + R+ + P +AAL RALK D ++ HN N+++ + I++ +
Sbjct: 62 VMVPITFKAREGALGRHPPSAALTFRALKPGDPDIERPMIYDHNRNVNITKKVEISESL- 120
Query: 449 NRS 457
N+S
Sbjct: 121 NKS 123
>UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 169
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 260 GLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHN 400
GLK+ ++ + Q +V+ + AL+I A + PR+++KQK ++ N
Sbjct: 77 GLKLILENMPKEVQRNQSVIRNFLALLIHARLQQPRNKQKQKKLRLN 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,572,711
Number of Sequences: 1657284
Number of extensions: 10606865
Number of successful extensions: 27321
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 26661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27304
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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