Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30105
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030422-1|ABO52842.1|  409|Drosophila melanogaster IP17664p pro...    30   1.6  
AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p pro...    30   1.6  
AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-P...    30   1.6  
AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-P...    30   1.6  
AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC...    29   4.9  
AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB...    29   4.9  
AY069580-1|AAL39725.1|  406|Drosophila melanogaster LD31675p pro...    28   6.5  
AE014134-2099|AAF53122.1|  406|Drosophila melanogaster CG14939-P...    28   6.5  
BT016018-1|AAV36903.1|  463|Drosophila melanogaster RE19971p pro...    28   8.6  
AY069121-1|AAL39266.1|  514|Drosophila melanogaster GH13192p pro...    28   8.6  
AY061535-1|AAL29083.1|  388|Drosophila melanogaster LP01629p pro...    28   8.6  
AY060735-1|AAL28283.1|  316|Drosophila melanogaster GH18603p pro...    28   8.6  
AF228283-1|AAK00731.1|  316|Drosophila melanogaster ubiquitin fu...    28   8.6  
AF228282-1|AAK00730.1|  316|Drosophila melanogaster ubiquitin fu...    28   8.6  
AE014297-4573|AAF57031.3|  476|Drosophila melanogaster CG9682-PA...    28   8.6  
AE014296-1911|AAF50090.1|  316|Drosophila melanogaster CG6233-PA...    28   8.6  
AE013599-155|AAF57277.1|  514|Drosophila melanogaster CG8345-PA ...    28   8.6  

>BT030422-1|ABO52842.1|  409|Drosophila melanogaster IP17664p
           protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 453 HLAGNVCGCDHLAGNVCGCDWHGNGRLHDGQGNNAGSL 340
           H++G +C   +      G   +GNG  ++G GNN  S+
Sbjct: 67  HISGGLCDNSNALNGGNGSSGNGNGNNNNGNGNNNNSM 104


>AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p
           protein.
          Length = 479

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = +2

Query: 398 HPHTLP---ARWSHPHTLPARWSH 460
           HPHT P   A+ SHPHTLP    H
Sbjct: 337 HPHTHPHPHAQHSHPHTLPHSLPH 360


>AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-PB,
           isoform B protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = +2

Query: 398 HPHTLP---ARWSHPHTLPARWSH 460
           HPHT P   A+ SHPHTLP    H
Sbjct: 641 HPHTHPHPHAQHSHPHTLPHSLPH 664


>AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-PA,
           isoform A protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = +2

Query: 398 HPHTLP---ARWSHPHTLPARWSH 460
           HPHT P   A+ SHPHTLP    H
Sbjct: 641 HPHTHPHPHAQHSHPHTLPHSLPH 664


>AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC,
           isoform C protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 112 PFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 213
           P+    G+Y  + GRY+   D  GRY  D+SG Y
Sbjct: 462 PYTPDNGKYNGNGGRYNGIND--GRYYHDDSGKY 493


>AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB,
           isoform B protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 112 PFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 213
           P+    G+Y  + GRY+   D  GRY  D+SG Y
Sbjct: 462 PYTPDNGKYNGNGGRYNGIND--GRYYHDDSGKY 493


>AY069580-1|AAL39725.1|  406|Drosophila melanogaster LD31675p
           protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 351 HCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGG 455
           H S  + + +H  AS  H+     GH   + QQGG
Sbjct: 38  HTSQHQLDGHHGSASAVHLHHHHHGHNQQQNQQGG 72


>AE014134-2099|AAF53122.1|  406|Drosophila melanogaster CG14939-PA
           protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 351 HCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGG 455
           H S  + + +H  AS  H+     GH   + QQGG
Sbjct: 38  HTSQHQLDGHHGSASAVHLHHHHHGHNQQQNQQGG 72


>BT016018-1|AAV36903.1|  463|Drosophila melanogaster RE19971p
           protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 453 HLAGNVCG-CDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVS 334
           H AGN  G   + AGNV G   +  G +    GN AGS+ +
Sbjct: 344 HAAGNAAGDVANAAGNVAGNASNAAGDVASAAGNVAGSVAN 384


>AY069121-1|AAL39266.1|  514|Drosophila melanogaster GH13192p
           protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 100 STVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 213
           STV+  V++  +Y  DP +YDP R NS      N  AY
Sbjct: 405 STVA--VHRDPQYWPDPEKYDPERFNSSNRDNLNMDAY 440


>AY061535-1|AAL29083.1|  388|Drosophila melanogaster LP01629p
           protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 453 HLAGNVCG-CDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVS 334
           H AGN  G   + AGNV G   +  G +    GN AGS+ +
Sbjct: 269 HAAGNAAGDVANAAGNVAGNASNAAGDVASAAGNVAGSVAN 309


>AY060735-1|AAL28283.1|  316|Drosophila melanogaster GH18603p
           protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 415 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDV 516
           S++ TP  V  KV+      YD+++G+IR+D ++
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNI 279


>AF228283-1|AAK00731.1|  316|Drosophila melanogaster ubiquitin
           fusion-degradation 1-like protein protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 415 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDV 516
           S++ TP  V  KV+      YD+++G+IR+D ++
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNI 279


>AF228282-1|AAK00730.1|  316|Drosophila melanogaster ubiquitin
           fusion-degradation 1-like protein protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 415 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDV 516
           S++ TP  V  KV+      YD+++G+IR+D ++
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNI 279


>AE014297-4573|AAF57031.3|  476|Drosophila melanogaster CG9682-PA
           protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 453 HLAGNVCG-CDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVS 334
           H AGN  G   + AGNV G   +  G +    GN AGS+ +
Sbjct: 357 HAAGNAAGDVANAAGNVAGNASNAAGDVASAAGNVAGSVAN 397


>AE014296-1911|AAF50090.1|  316|Drosophila melanogaster CG6233-PA
           protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 415 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDV 516
           S++ TP  V  KV+      YD+++G+IR+D ++
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNI 279


>AE013599-155|AAF57277.1|  514|Drosophila melanogaster CG8345-PA
           protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 100 STVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 213
           STV+  V++  +Y  DP +YDP R NS      N  AY
Sbjct: 405 STVA--VHRDPQYWPDPEKYDPERFNSSNRDNLNMDAY 440


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,538,543
Number of Sequences: 53049
Number of extensions: 355697
Number of successful extensions: 1560
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)