Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30104
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 408 HQYRQ*LSSQIQGHEQPFQQQVHLFHQKLFFFQND 304
           +QY + +     GH + F  QV + H ++    N+
Sbjct: 199 NQYIKQVCKLNNGHYKNFLSQVEIIHNEILVTHNE 233


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 408 HQYRQ*LSSQIQGHEQPFQQQVHLFHQKLFFFQND 304
           +QY + +     GH + F  QV + H ++    N+
Sbjct: 24  NQYIKQVCKLNNGHYKNFLSQVEIIHNEILVTHNE 58


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 289  FTPTSLIIAGEISPVKAPFGDFQQFWAATSTLSGMIVFT*D 167
            F P +L+++  +SP KA         A +  L  + V T D
Sbjct: 2474 FKPKNLLLSAAVSPSKAVMDAGYDVPALSQYLDWIAVMTYD 2514


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 197 CRSCSPELLEVSKRSFYW*N 256
           C   + E  +++K  FYW N
Sbjct: 304 CAGATSEAEKIAKICFYWLN 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,047
Number of Sequences: 336
Number of extensions: 2456
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)