Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30103
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0575 + 18885403-18885483,18885591-18885949,18886320-18886617     27   6.8  
12_01_0213 - 1614964-1615022,1615329-1615521                           27   8.9  

>10_08_0575 + 18885403-18885483,18885591-18885949,18886320-18886617
          Length = 245

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 425 RQRDSHWVTNSNWMI 381
           R RD HW+T   WMI
Sbjct: 135 RTRDVHWMTQGTWMI 149


>12_01_0213 - 1614964-1615022,1615329-1615521
          Length = 83

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 373 YAGIIQLLLVTQCESLCLSFKRKLDLQMSYCR 468
           Y   + + +VT C  LC S+ R + L M+Y R
Sbjct: 51  YGSFLFVWIVTLCTDLCTSYNRSI-LAMAYSR 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,458,177
Number of Sequences: 37544
Number of extensions: 200689
Number of successful extensions: 295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)