Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30102
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   0.70 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   2.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   2.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.6  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 377 GGHASGFXHVTINEGTXKRLFXIKGKRNVRVKQVKP 484
           GG   G    T +E T   L   K +   RVK+ KP
Sbjct: 137 GGKGGGVIQGTASEATLVALLGAKARMIDRVKKEKP 172


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 212 ARNGCPMLDGP 180
           ARNG P +DGP
Sbjct: 460 ARNGSPNVDGP 470


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 212 ARNGCPMLDGP 180
           ARNG P +DGP
Sbjct: 460 ARNGSPNVDGP 470


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 212 ARNGCPMLDGP 180
           ARNG P +DGP
Sbjct: 462 ARNGSPNVDGP 472


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 501 FKDSNVGFTCLTRTFLL 451
           +KDSN+G       FLL
Sbjct: 103 YKDSNIGLVVANAFFLL 119


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 91  LNPPYFETRLPAGI 50
           LNPP  +T+LP  +
Sbjct: 198 LNPPVTQTQLPLNL 211


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 265 ELGRRTIPGISGTAPRGPILXVQ 333
           EL RRTI G+S       I+ VQ
Sbjct: 313 ELNRRTILGVSNAVITFLIVMVQ 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,455
Number of Sequences: 336
Number of extensions: 2260
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)