Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30102
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical pr...   142   1e-34
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho...    73   2e-13
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi...    73   2e-13
AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical ...    29   1.5  
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    28   4.6  
U41540-5|AAK39229.2|  666|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U23170-1|AAC46699.1|  163|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical
           protein K06A4.3 protein.
          Length = 475

 Score =  142 bits (344), Expect = 1e-34
 Identities = 76/158 (48%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
 Frame = +2

Query: 41  AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 220
           A A+ G+K GL +WRI  F    VP+   G+FY GD+YI L    D     WD+HFWLG 
Sbjct: 9   ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65

Query: 221 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYXSKEFLEYFSPAIRYLKGGHASGFX 400
             S DE G AAI TV +DD    G   QHRE+Q Y S  FL YF   IRY+ GG+ SG+ 
Sbjct: 66  NASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYR 124

Query: 401 HVTINEGTXK-RLFXIKGKRNVRVKQVKPTFESLNNGD 511
           HV       K  LF  KGKRNVR  +V+    SLN GD
Sbjct: 125 HVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGD 162


>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
           homolog protein.
          Length = 1257

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
 Frame = +2

Query: 50  DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 226
           D G   G+ +W IENF P  + +   G FY  D+Y+VL TT +   +L   I +WLG   
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562

Query: 227 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYXSKEFLEYFSPAIRYLKGGHASGFXHV 406
           S D+   +A+  V L +     +    RE     ++EFL  F   I Y++GG      + 
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGFYT 621

Query: 407 TINEGTXKRLF--XIKGKRNVRVKQVKPTFESLNNGDC 514
           T       RL+   + G   V ++ V  + ESL+   C
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFC 658



 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 71  LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 163
           +E + +E  + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933


>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
           flightless) homologprotein 1 protein.
          Length = 1257

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
 Frame = +2

Query: 50  DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 226
           D G   G+ +W IENF P  + +   G FY  D+Y+VL TT +   +L   I +WLG   
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562

Query: 227 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYXSKEFLEYFSPAIRYLKGGHASGFXHV 406
           S D+   +A+  V L +     +    RE     ++EFL  F   I Y++GG      + 
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGFYT 621

Query: 407 TINEGTXKRLF--XIKGKRNVRVKQVKPTFESLNNGDC 514
           T       RL+   + G   V ++ V  + ESL+   C
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFC 658



 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 71  LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 163
           +E + +E  + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933


>AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.1 protein.
          Length = 543

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 105 SPFRRLSSVSSTPGTPTLY*TP 170
           SP +R SSV + PGTP +Y  P
Sbjct: 105 SPRKRFSSVETNPGTPRIYLPP 126


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 11/121 (9%)
 Frame = +3

Query: 9   ARDLKCLKYTKHSRMPAGSRVSKYGGLRTSNRSPFRRLSSVSSTPG--TPTLY*TPQAIR 182
           A ++   K T HS   +  R  +    R+ ++SP RR S   S  G  TP    + ++  
Sbjct: 279 AAEISRRKSTSHSTSLSKRRYLRSRS-RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSES 337

Query: 183 TV*H--GTSISGSARGPARTKPARRPSSR-------*TWTTNNSRDQRYSTERSNITSPR 335
           T     G      +R P R +P RR  SR         WT   SR +  +   S +T P 
Sbjct: 338 TSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPL 397

Query: 336 S 338
           S
Sbjct: 398 S 398


>U41540-5|AAK39229.2|  666|Caenorhabditis elegans Hypothetical
           protein F35H12.4 protein.
          Length = 666

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 127 RSLLLRGLLHCTEHHRR 177
           +SLLLRGL+   +HHRR
Sbjct: 579 KSLLLRGLMAARKHHRR 595


>U23170-1|AAC46699.1|  163|Caenorhabditis elegans Hypothetical
           protein F58F12.1 protein.
          Length = 163

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +2

Query: 356 PAIRYLKGGHASGFXHVTINEGTXKRLFXIKGKRNVRV 469
           P I  LK G  S    VT NEGT +RLF   G  +V +
Sbjct: 68  PTIGVLKPGVVS----VTTNEGTVQRLFVSSGTLSVNI 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,434,682
Number of Sequences: 27780
Number of extensions: 229344
Number of successful extensions: 613
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)