Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30101
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0491 + 4093952-4094145,4094336-4094642,4094700-4094799,409...    27   6.8  

>05_01_0491 +
           4093952-4094145,4094336-4094642,4094700-4094799,
           4094823-4094953,4095546-4095823,4095909-4096225,
           4096322-4096506
          Length = 503

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 143 IFQTMLKEETLNILNKINSKISFYFIQSHT*THVIWFTLNYYYRY 9
           I  ++ K +  NI  K++    FYFI+  T   +    L YY  Y
Sbjct: 202 ILVSLRKVDLFNIFKKVHGGAKFYFIKLGTKILISSVKLRYYESY 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,208,427
Number of Sequences: 37544
Number of extensions: 138315
Number of successful extensions: 284
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)