Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30101
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g41250.1 68418.m05013 exostosin family protein contains Pfam ...    29   2.5  
At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family...    28   3.2  
At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family...    28   3.2  
At1g63450.1 68414.m07175 exostosin family protein contains Pfam ...    27   7.5  

>At5g41250.1 68418.m05013 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 561

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = -2

Query: 206 HSGQFNVAFDTLNEH*KYSLYIFQTMLKEETLNILNKINSK 84
           ++  +  A+    +H KYS+YI +  +KE+ +N++  + +K
Sbjct: 469 YTAYYQYAWHLPEDHRKYSVYISEQDVKEKRVNVVEILKAK 509


>At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 190

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 339 IP*VLFYIMCTDNICITCLNDYFK 268
           +P  + +I+CT N+CI  ++DY K
Sbjct: 28  VPGKIQHIICTGNLCIKEIHDYLK 51


>At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 190

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 339 IP*VLFYIMCTDNICITCLNDYFK 268
           +P  + +I+CT N+CI  ++DY K
Sbjct: 28  VPGKIQHIICTGNLCIKEIHDYLK 51


>At1g63450.1 68414.m07175 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 641

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -2

Query: 206 HSGQFNVAFDTLNEH*KYSLYIFQTMLKEETLNILNKINSK 84
           +S  +   +    +H +YS+YI +  +K + +N++ K+ SK
Sbjct: 550 YSAYYQYTWHLPEDHRRYSVYINKEDVKLKRVNVIEKLMSK 590


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,294,745
Number of Sequences: 28952
Number of extensions: 134082
Number of successful extensions: 242
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)