Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30100
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 273 PPSTPWAGSRPIRSSMXWSVRLL 341
           PP  P  GS   R+ + W V+ L
Sbjct: 38  PPREPTVGSEVKRTYIEWGVKFL 60


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 273 PPSTPWAGSRPIRSSMXWSVRLL 341
           PP  P  GS   R+ + W V+ L
Sbjct: 38  PPREPTVGSEVKRTYIEWGVKFL 60


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 255  ARTTCAPPSTPWAGSRPIRSS 317
            A +T AP +TP    +P+ ++
Sbjct: 2288 ASSTMAPSTTPMVPDKPVTTT 2308


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 206 FKEAFQLMDHDXDGIIGKNDLRATFDSLGRLASD 307
           F +AF++ DH+ D       ++    ++   ASD
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 206 FKEAFQLMDHDXDGIIGKNDLRATFDSLGRLASD 307
           F +AF++ DH+ D       ++    ++   ASD
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 206 FKEAFQLMDHDXDGIIGKNDLRATFDSLGRLASD 307
           F +AF++ DH+ D       ++    ++   ASD
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 206 FKEAFQLMDHDXDGIIGKNDLRATFDSLGRLASD 307
           F +AF++ DH+ D       ++    ++   ASD
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,019
Number of Sequences: 336
Number of extensions: 1278
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)