Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30098
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   2.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    24   3.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.1  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 370 RSYCLLVTKSFFNLVTYCI 314
           ++YC+    SFFN + YCI
Sbjct: 159 KAYCIF---SFFNTIVYCI 174


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 479 VNVALREHPHIGEVVFDVQCLDPLVPSPRL 390
           V+V +R HP + E V+    + PLVP+P L
Sbjct: 583 VSVYVR-HPLLSEYVYKNITVAPLVPTPCL 611


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 408  QWIEALDIKHYFTNVWVFTE 467
            +W+ AL  K YFTN W + +
Sbjct: 1357 KWL-ALGFKVYFTNAWCWLD 1375


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 23  CVCEHNLNSKYLFIK 67
           C+C  +LNS+ + +K
Sbjct: 368 CICHRDLNSRNILVK 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,306
Number of Sequences: 2352
Number of extensions: 12987
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)