Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30098
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-1|CAB07370.1|  450|Caenorhabditis elegans Hypothetical pr...    53   1e-07
Z99281-25|CAE18028.1|  159|Caenorhabditis elegans Hypothetical p...    30   0.85 
Z77652-1|CAB01121.1|  254|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AL033510-4|CAA22070.2|  343|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AF026208-3|AAB71267.3|  903|Caenorhabditis elegans Hypothetical ...    28   4.6  
U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z81523-12|CAH60774.1|  364|Caenorhabditis elegans Hypothetical p...    27   8.0  
Z81096-1|CAB03161.3|  478|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z81086-10|CAH60775.1|  364|Caenorhabditis elegans Hypothetical p...    27   8.0  
Z68749-1|CAA92960.2|  309|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL117195-27|CAE18006.1|  243|Caenorhabditis elegans Hypothetical...    27   8.0  

>Z92832-1|CAB07370.1|  450|Caenorhabditis elegans Hypothetical
           protein F31D4.2 protein.
          Length = 450

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 27/109 (24%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
 Frame = +3

Query: 186 SFAYYSLKERLPVILTKIIDYLSREGSKIKSTHGASDE-DILSYIQYVTKLKNDLVTNKQ 362
           +FAYY++++R P I+T ++D L+++ + +   +G+  E DI + ++  +KL+ +++T+K 
Sbjct: 21  TFAYYTVRDRWPKIVTGLVDQLAQKRASLIEKYGSEVESDIAAILEVFSKLRYEIMTDKP 80

Query: 363 YDLLTVDTPEARRWNQWI---------EALDIKHYFTNVWVFTECYVYR 482
              L     ++  W   +         + ++   +F   W+F EC++YR
Sbjct: 81  LCNLMDTQLDSEMWRNLLSDMRTAAMPDEVEDLTFFKGPWLFVECWLYR 129


>Z99281-25|CAE18028.1|  159|Caenorhabditis elegans Hypothetical
           protein Y57G11C.45 protein.
          Length = 159

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 382 TRPRRGDGTSGSRHWTSNTTSPMCGCSRSATFTEG 486
           TRPRR DG  GS +W     +P    S   T  +G
Sbjct: 91  TRPRRSDGLRGSFYWARFVDTPAASNSVEYTTLDG 125


>Z77652-1|CAB01121.1|  254|Caenorhabditis elegans Hypothetical
           protein C06B3.1 protein.
          Length = 254

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 120 VNLPVMRIVTPKNEFMCGIYGMSFAYYSL 206
           +NLPV  I    N  +CG++GMS A+++L
Sbjct: 82  LNLPVSFIYI-MNLMLCGMFGMSMAFFAL 109


>AL033510-4|CAA22070.2|  343|Caenorhabditis elegans Hypothetical
           protein Y40H7A.6 protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 126 NSLXLWANRKVPWLAFCVYFFIKRYFELRLCSQTQYSCIN 7
           NSL ++ +  V WL F + F   R F L++  Q+ +SC N
Sbjct: 114 NSLYMFTSYLVTWLVFSLTFDRNRIFFLKI-FQSFFSCFN 152


>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 162 IHFWVSRCASPANSLXLWANRKVPWLAFCVYFFIKRY 52
           ++FW S    P   + +WA   V  LAF    F+ RY
Sbjct: 77  LNFWTSSQTLPEFFISVWAGLYVTILAFIAVQFVYRY 113


>AF026208-3|AAB71267.3|  903|Caenorhabditis elegans Hypothetical
           protein F52D1.1 protein.
          Length = 903

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 122 EFAGDAHRDTQK*IYVWNLRNELRILFTERETASDPNENHRLFIQRGI*N 271
           +FA D ++ T K +++WN  NE  +      T     ++H  F  R + N
Sbjct: 476 QFAFDKYKGTTKDVHIWNDMNEPSVFNGPEITMHKDAKHHGEFEHRDVHN 525


>U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical
           protein C25H3.11 protein.
          Length = 947

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 345 LVTNKQYDLLTVDTPEARRWNQWIEALDIKH 437
           L + K+YD+  V+  E +R  Q +E L+++H
Sbjct: 92  LSSEKRYDVEAVEQVEQQRKEQMLEELELRH 122


>Z81523-12|CAH60774.1|  364|Caenorhabditis elegans Hypothetical
           protein F32H2.11 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 186 SFAYYSLKERLPVILTKIIDYLSREGSKIKSTHGASDEDILSYI 317
           S++ + +KE L V   +I DYLSR   +++     S   + +YI
Sbjct: 321 SYSQWKMKEHLMVSSREIEDYLSRRFDEVERRRWESLAYVATYI 364


>Z81096-1|CAB03161.3|  478|Caenorhabditis elegans Hypothetical
           protein K03H4.1 protein.
          Length = 478

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
 Frame = +3

Query: 51  STFL*KNKHKKPTMAPYDWPIXTVNLPVMRIVTPKNEFMCGIYGMSFAYYSLKERLPVIL 230
           S+F+ K++ K+P +  YD  + T  L   ++    N          +  YS+ + + + L
Sbjct: 8   SSFILKSEPKQPILLKYDAEVYTTILQFGQVTRNAN----------WRVYSILDHVFLKL 57

Query: 231 TKIIDYLSREGSKIKSTHGASDEDILSYIQYV-TKLKNDLVTNKQYDLLTVDTPEARRWN 407
            K++D    E   +      SD++ +  ++ +  KLKN  + +  + ++   + E    +
Sbjct: 58  EKLVD----EPIWLLLNVNRSDQETVCKLKIIFEKLKNLPIVHSSFRIIVAYSDEISASD 113

Query: 408 QWIEALDIKHYFT 446
           + IE    + YF+
Sbjct: 114 ELIEISSHRFYFS 126


>Z81086-10|CAH60775.1|  364|Caenorhabditis elegans Hypothetical
           protein F32H2.11 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 186 SFAYYSLKERLPVILTKIIDYLSREGSKIKSTHGASDEDILSYI 317
           S++ + +KE L V   +I DYLSR   +++     S   + +YI
Sbjct: 321 SYSQWKMKEHLMVSSREIEDYLSRRFDEVERRRWESLAYVATYI 364


>Z68749-1|CAA92960.2|  309|Caenorhabditis elegans Hypothetical
           protein F56H11.3 protein.
          Length = 309

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 159 EFMCGIYGMSFAYYSL 206
           +FMC IYG +  YYSL
Sbjct: 241 QFMCFIYGCTLMYYSL 256


>AL117195-27|CAE18006.1|  243|Caenorhabditis elegans Hypothetical
           protein Y57A10A.35 protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 382 STVSRSYCLLVTKSFFNLVTYCIYESMSSSLAPCVDLILDPS 257
           STVS  +  L T SF  L        ++  LA C+D+I  PS
Sbjct: 196 STVSYIFSPLTTPSFLLLYLNVFASLLAVMLAWCIDIISRPS 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,207
Number of Sequences: 27780
Number of extensions: 264925
Number of successful extensions: 715
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)