Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30096
         (816 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   4.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   4.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.5  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   5.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.8  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 23/114 (20%), Positives = 48/114 (42%)
 Frame = +1

Query: 475 QRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISL 654
           +R E   +   A    M D  +T       KKS+    ++ +LE+N+        +K+ +
Sbjct: 14  ERREREAEHGYASTMPMPDDMRTVTKRPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKV 73

Query: 655 SIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 816
            + + P T    ++  L  KA+   + + + E +    +E+  R+   L+   E
Sbjct: 74  LVPLGPETSRHTTLG-LLTKAKRFIKSLEERERKHAVHKEQLSREQRFLRRRLE 126


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 493 EKKRQAMLQAMKDASKTGPNFTIQKKSE 576
           EKKRQA L  + +A + G   T ++  E
Sbjct: 313 EKKRQAFLDLLIEAGQNGVLLTDKEVKE 340


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFG 585
           I  + +R++  EK    +L  + +AS   PN  +     NFG
Sbjct: 327 INTRGERIQLTEKNGIDVLGNIMEASILSPNQNVYGDLHNFG 368


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 307 AVCAIR*CIPSTVHP 263
           A C I  C P TVHP
Sbjct: 357 AFCNIVSCSPQTVHP 371


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = +2

Query: 2    DPRPPRRGLHIPTSLCCRSKNQCRVTE*PTSTRATLNKQPT 124
            DP P +RG + P       + Q +    P S  A   K  T
Sbjct: 988  DPSPFKRGRYTPPQPANAQQGQAQAQAKPQSQEANKPKPAT 1028


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,742
Number of Sequences: 438
Number of extensions: 2409
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)