Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30092
(828 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QCJ9 Cluster: Mediator of RNA polymerase II transcrip... 144 2e-33
UniRef50_Q9VNG0 Cluster: Mediator of RNA polymerase II transcrip... 126 7e-28
UniRef50_Q6P2C8 Cluster: Mediator of RNA polymerase II transcrip... 116 7e-25
UniRef50_UPI0000584510 Cluster: PREDICTED: similar to Cofactor r... 103 5e-21
UniRef50_A7RWD3 Cluster: Predicted protein; n=1; Nematostella ve... 80 8e-14
UniRef50_Q5DHY9 Cluster: SJCHGC09344 protein; n=1; Schistosoma j... 78 2e-13
UniRef50_Q4JSC0 Cluster: Actin; n=13; Coelomata|Rep: Actin - Ano... 67 4e-10
UniRef50_Q55BX7 Cluster: Putative uncharacterized protein; n=1; ... 59 2e-07
UniRef50_A7QA21 Cluster: Chromosome chr8 scaffold_68, whole geno... 57 6e-07
UniRef50_O65314 Cluster: Actin; n=20; Eukaryota|Rep: Actin - Sch... 53 8e-06
UniRef50_P02581 Cluster: Actin-1; n=1852; Eukaryota|Rep: Actin-1... 47 7e-04
UniRef50_Q8LKR2 Cluster: Actin-related protein 4; n=7; core eudi... 46 0.002
UniRef50_P14883 Cluster: Actin-2; n=75; Eukaryota|Rep: Actin-2 -... 46 0.002
UniRef50_UPI0001554F81 Cluster: PREDICTED: similar to actin; n=1... 45 0.002
UniRef50_A3BPG0 Cluster: Putative uncharacterized protein; n=3; ... 45 0.003
UniRef50_Q7M3Y5 Cluster: Actin; n=1; Aplysia californica|Rep: Ac... 42 0.025
UniRef50_UPI00015B6274 Cluster: PREDICTED: similar to putative m... 41 0.033
UniRef50_A4S826 Cluster: Predicted protein; n=1; Ostreococcus lu... 41 0.033
UniRef50_A2D8U3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.044
UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1; ... 40 0.058
UniRef50_UPI0000449751 Cluster: PREDICTED: similar to gamma-acti... 39 0.18
UniRef50_Q4CV94 Cluster: Actin 2, putative; n=2; Trypanosoma cru... 39 0.18
UniRef50_Q5CKL2 Cluster: BRG1/brm-associated factor 53A; n=2; Cr... 38 0.23
UniRef50_Q54UQ7 Cluster: Actin-like protein 6A; n=1; Dictyosteli... 38 0.23
UniRef50_A7RPC3 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 38 0.23
UniRef50_Q7RSE9 Cluster: Putative uncharacterized protein PY0041... 38 0.31
UniRef50_A2DKQ5 Cluster: Actin 58, putative; n=2; Trichomonas va... 38 0.31
UniRef50_Q5KLG9 Cluster: 53 kDa brg1-associated factor b (Actin-... 38 0.41
UniRef50_Q6C061 Cluster: Actin-related protein 4; n=1; Yarrowia ... 37 0.54
UniRef50_Q9XZB9 Cluster: Actin; n=1; Sterkiella nova|Rep: Actin ... 37 0.71
UniRef50_Q4YXY6 Cluster: Putative uncharacterized protein; n=2; ... 37 0.71
UniRef50_Q0H7S7 Cluster: Actin; n=29; Sordariomycetes|Rep: Actin... 37 0.71
UniRef50_P61163 Cluster: Alpha-centractin; n=356; root|Rep: Alph... 37 0.71
UniRef50_Q22WQ4 Cluster: Actin family protein; n=1; Tetrahymena ... 36 0.94
UniRef50_Q17GZ9 Cluster: Actin-related protein 5; n=4; Endoptery... 36 0.94
UniRef50_Q8TDY3 Cluster: Actin-related protein T2; n=26; Amniota... 36 0.94
UniRef50_Q4N681 Cluster: Actin, putative; n=3; Piroplasmida|Rep:... 36 1.2
UniRef50_A6R1X8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A7S2B1 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.6
UniRef50_A2DKP2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_A0DAC2 Cluster: Chromosome undetermined scaffold_43, wh... 36 1.6
UniRef50_Q4P2E8 Cluster: Actin-related protein 4; n=1; Ustilago ... 36 1.6
UniRef50_Q00UL2 Cluster: Alpha amylase 1; n=3; Ostreococcus|Rep:... 35 2.2
UniRef50_Q5C683 Cluster: SJCHGC08418 protein; n=1; Schistosoma j... 35 2.2
UniRef50_UPI0000449ED3 Cluster: PREDICTED: similar to RIKEN cDNA... 35 2.9
UniRef50_A4QNT8 Cluster: Si:ch211-241j12.3 protein; n=3; Danio r... 35 2.9
UniRef50_Q9P7X7 Cluster: Actin-related protein 4; n=1; Schizosac... 35 2.9
UniRef50_UPI0000F2DE11 Cluster: PREDICTED: similar to testis-spe... 34 3.8
UniRef50_A4RW28 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 3.8
UniRef50_A2EUM6 Cluster: Actin family protein; n=1; Trichomonas ... 34 3.8
UniRef50_A5E2K2 Cluster: Actin; n=5; Saccharomycetales|Rep: Acti... 34 3.8
UniRef50_UPI0000F2D326 Cluster: PREDICTED: similar to actin; n=1... 34 5.0
UniRef50_UPI00006CB6F4 Cluster: Erv1 / Alr family protein; n=1; ... 34 5.0
UniRef50_Q18PR4 Cluster: Actin-related protein; n=1; Porphyra ye... 34 5.0
UniRef50_Q7RBW3 Cluster: Putative uncharacterized protein PY0602... 34 5.0
UniRef50_Q6C0A9 Cluster: Yarrowia lipolytica chromosome F of str... 34 5.0
UniRef50_Q11NV5 Cluster: Membrane protein; n=1; Cytophaga hutchi... 33 6.6
UniRef50_Q54E71 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A2QI94 Cluster: Contig An04c0110, complete genome; n=8;... 33 6.6
UniRef50_O96019 Cluster: Actin-like protein 6A; n=63; Eumetazoa|... 33 6.6
UniRef50_UPI00005864C8 Cluster: PREDICTED: similar to Actin; n=4... 33 8.7
UniRef50_Q8IDZ2 Cluster: Putative uncharacterized protein PF13_0... 33 8.7
>UniRef50_Q7QCJ9 Cluster: Mediator of RNA polymerase II
transcription subunit 27; n=5; Endopterygota|Rep:
Mediator of RNA polymerase II transcription subunit 27 -
Anopheles gambiae (African malaria mosquito)
Length = 295
Score = 144 bits (350), Expect = 2e-33
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = -3
Query: 637 WTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHLHH 458
WTESRH VFRKV ++AH+AMLHF+SPTLPELA+RSF+TW SYV LF++PCK+C HLH+
Sbjct: 215 WTESRHQVFRKVQDHAHSAMLHFFSPTLPELAIRSFITWFRSYVTLFADPCKKCGKHLHN 274
Query: 457 TSLLPPAWRDFRTLETFHDECKQ 389
T LPP WRD RTLE FH+ECKQ
Sbjct: 275 T--LPPTWRDLRTLEPFHEECKQ 295
>UniRef50_Q9VNG0 Cluster: Mediator of RNA polymerase II
transcription subunit 27; n=1; Drosophila
melanogaster|Rep: Mediator of RNA polymerase II
transcription subunit 27 - Drosophila melanogaster
(Fruit fly)
Length = 293
Score = 126 bits (304), Expect = 7e-28
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = -3
Query: 643 DLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHL 464
DLW ESR+ VFRKV ++AH+AMLHF+SPTLP+LAV+S++TWL+S+V LF EPCKRC +
Sbjct: 210 DLWAESRYEVFRKVQDHAHSAMLHFFSPTLPDLAVKSYITWLNSHVKLFLEPCKRCGKFV 269
Query: 463 HHTSLLPPAWRDFRTLETFHDECK 392
+ LPP WRD RTLE FH++C+
Sbjct: 270 --VNGLPPTWRDLRTLEPFHEDCR 291
>UniRef50_Q6P2C8 Cluster: Mediator of RNA polymerase II
transcription subunit 27; n=34; Euteleostomi|Rep:
Mediator of RNA polymerase II transcription subunit 27 -
Homo sapiens (Human)
Length = 311
Score = 116 bits (279), Expect = 7e-25
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = -3
Query: 646 LDLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCH 467
LD+W++S + VF+KVT++A A+LH+ P +P++ VRSFMTWL SY+ LF PC+RC
Sbjct: 228 LDIWSKSNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKF 287
Query: 466 LHHTSLLPPAWRDFRTLETFHDECKQ 389
L LPP WRDFRTLE FHD C+Q
Sbjct: 288 LQDG--LPPTWRDFRTLEAFHDTCRQ 311
>UniRef50_UPI0000584510 Cluster: PREDICTED: similar to Cofactor
required for Sp1 transcriptional activation, subunit 8;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Cofactor required for Sp1 transcriptional
activation, subunit 8 - Strongylocentrotus purpuratus
Length = 244
Score = 103 bits (247), Expect = 5e-21
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = -3
Query: 649 TLDLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSC 470
TLDLWT S++ VF+K+TE+A AA L +Y PT+ +L+ RSFM WL+S+ LFS PC+ C
Sbjct: 160 TLDLWTASKYEVFQKITEHATAASLRYYLPTMQDLSFRSFMHWLNSFSKLFSTPCRLCGK 219
Query: 469 HLHHTSLLPPAWRDFRTLETFHDECK 392
++ LPP WR FRT+E +H+ C+
Sbjct: 220 YIKDN--LPPTWRCFRTVEPYHECCR 243
>UniRef50_A7RWD3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 307
Score = 79.8 bits (188), Expect = 8e-14
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = -3
Query: 643 DLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHL 464
D+W+ S+H VF+K+T+ A++A LH+Y+ P + M WL S+ +FS C +C+ HL
Sbjct: 218 DIWSPSKHIVFQKLTDYANSAALHYYNSAEPFTQILCLMKWLDSFHGMFSRKCTKCNQHL 277
Query: 463 HHTS---LLPPAWRDFRTLETFHDECK 392
S LLPP WR L +H CK
Sbjct: 278 KEESENALLPPCWRTMDALLPYHYSCK 304
>UniRef50_Q5DHY9 Cluster: SJCHGC09344 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09344 protein - Schistosoma
japonicum (Blood fluke)
Length = 511
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Frame = -3
Query: 652 ETLDLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCS 473
+ LDL+T SRH +FR++T A A+LHF + P A+R F WLHSY +LFS PC RC
Sbjct: 415 QKLDLFTPSRHPLFRRITSLAQCALLHFSNEYKPPSAIRGFFAWLHSYRDLFSAPCCRCG 474
Query: 472 CHLHHTSLLPPAWR--------DFRTLETFHDECK 392
L L P WR D R++E H+ C+
Sbjct: 475 QLLGQNVEL-PIWRSYPQLRKDDSRSMEPQHEHCQ 508
>UniRef50_Q4JSC0 Cluster: Actin; n=13; Coelomata|Rep: Actin -
Anopheles gambiae (African malaria mosquito)
Length = 376
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +2
Query: 734 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
MCDDD ALVVDNGSGMCKAGFAGDDAPRAV
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAV 31
>UniRef50_Q55BX7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 450
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = -3
Query: 640 LWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHLH 461
LW S++++F+K++EN+ A+ ++ + ++ ++W+ S+ LF E CK C LH
Sbjct: 336 LWASSKYNIFKKISENSFEAISYYSANPNGGSILKCILSWIWSFRGLFLEECKGCQDILH 395
Query: 460 HTS----LLPPAWRDFRTLETFHDECKQ 389
S LPP++R F +H C Q
Sbjct: 396 LDSPQYMYLPPSFRTFDNYTPYHPSCYQ 423
>UniRef50_A7QA21 Cluster: Chromosome chr8 scaffold_68, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_68, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 357
Score = 56.8 bits (131), Expect = 6e-07
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -3
Query: 628 SRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRC----SCHLH 461
S +HVF+ VTE+A A+ HF T E A+ S + W+ SY LF+EPC +C S
Sbjct: 250 SVYHVFKHVTEHAAMALQHFLG-TNTETALYSLLHWIFSYQTLFTEPCSKCKRLLSMDRQ 308
Query: 460 HTSLLPPAWRDFRT 419
LLPP + +R+
Sbjct: 309 SDLLLPPVYHPYRS 322
>UniRef50_O65314 Cluster: Actin; n=20; Eukaryota|Rep: Actin -
Scherffelia dubia
Length = 378
Score = 53.2 bits (122), Expect = 8e-06
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2
Query: 740 DDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D +V+ALV DNGSGM KAGFAGDDAPRAV
Sbjct: 5 DGEVSALVCDNGSGMVKAGFAGDDAPRAV 33
>UniRef50_P02581 Cluster: Actin-1; n=1852; Eukaryota|Rep: Actin-1 -
Glycine max (Soybean)
Length = 377
Score = 46.8 bits (106), Expect = 7e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAG AGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGLAGDDAPRAV 32
>UniRef50_Q8LKR2 Cluster: Actin-related protein 4; n=7; core
eudicotyledons|Rep: Actin-related protein 4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 442
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+A+VVD GS CKAG+AG+DAP+AV
Sbjct: 6 DEVSAIVVDLGSHTCKAGYAGEDAPKAV 33
>UniRef50_P14883 Cluster: Actin-2; n=75; Eukaryota|Rep: Actin-2 -
Plasmodium falciparum
Length = 376
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
++ ALVVDNGSGM K+G AGDDAP+ V
Sbjct: 3 EEAVALVVDNGSGMVKSGLAGDDAPKCV 30
>UniRef50_UPI0001554F81 Cluster: PREDICTED: similar to actin; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
actin - Ornithorhynchus anatinus
Length = 376
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +2
Query: 749 VAALVVDNGSGMCKAGFAGDDAPRAV 826
+ LV+DNG+G+CKAGFAGD+AP+ V
Sbjct: 1 MTTLVIDNGTGLCKAGFAGDNAPKLV 26
>UniRef50_A3BPG0 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 467
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+A+V+D GS CKAG+AGDD P+AV
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAV 32
>UniRef50_Q7M3Y5 Cluster: Actin; n=1; Aplysia californica|Rep: Actin
- Aplysia californica (California sea hare)
Length = 92
Score = 41.5 bits (93), Expect = 0.025
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 749 VAALVVDNGSGMCKAGFAGD 808
VAALVVDNGSGM KAGFAGD
Sbjct: 1 VAALVVDNGSGMXKAGFAGD 20
>UniRef50_UPI00015B6274 Cluster: PREDICTED: similar to putative mRNA
splicing factor; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to putative mRNA splicing factor -
Nasonia vitripennis
Length = 515
Score = 41.1 bits (92), Expect = 0.033
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -3
Query: 826 DGAGRVVAGETGLAHAGAIVDYKRSNIVVAH 734
DG+ RVVAGET LAH+ +IV+++ +VVAH
Sbjct: 480 DGSRRVVAGETSLAHSRSIVNHESGYVVVAH 510
>UniRef50_A4S826 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 346
Score = 41.1 bits (92), Expect = 0.033
Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Frame = +2
Query: 734 MCDD-DVAALVVDNGSGMCKAGFAGDD 811
M D+ +++ALV DNGSGM KAGFAGDD
Sbjct: 1 MADEGELSALVCDNGSGMVKAGFAGDD 27
>UniRef50_A2D8U3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 280
Score = 40.7 bits (91), Expect = 0.044
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 544 AVRSFMTWLHSYVNLFSEPCKRCSCHLHHT---SLLPPAWRDFRTLETFHDEC 395
A+ F WL SY NLFS PC +C + LLPP R + +H C
Sbjct: 198 AIVEFAIWLKSYKNLFSAPCTKCEQFISRDLTGDLLPPIIRTITSCLPYHIRC 250
>UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1;
Bigelowiella natans|Rep: Ubiquitin/actin fusion protein
4 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 234
Score = 40.3 bits (90), Expect = 0.058
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPR 820
++ LVVDNGS M KAGFAGD APR
Sbjct: 78 EECQPLVVDNGSDMIKAGFAGDGAPR 103
>UniRef50_UPI0000449751 Cluster: PREDICTED: similar to gamma-actin;
n=3; Amniota|Rep: PREDICTED: similar to gamma-actin -
Gallus gallus
Length = 377
Score = 38.7 bits (86), Expect = 0.18
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPRAV 826
+V DNGSG CKAG +G+ APR+V
Sbjct: 12 VVFDNGSGQCKAGLSGEQAPRSV 34
>UniRef50_Q4CV94 Cluster: Actin 2, putative; n=2; Trypanosoma
cruzi|Rep: Actin 2, putative - Trypanosoma cruzi
Length = 392
Score = 38.7 bits (86), Expect = 0.18
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+ A+V+DNGSG K GFAG++ PR V
Sbjct: 7 DEEPAVVLDNGSGNIKCGFAGEEIPRCV 34
>UniRef50_Q5CKL2 Cluster: BRG1/brm-associated factor 53A; n=2;
Cryptosporidium|Rep: BRG1/brm-associated factor 53A -
Cryptosporidium hominis
Length = 423
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
DDV A++VD GS M K G+ G+D PR V
Sbjct: 11 DDVGAIIVDVGSYMTKIGYGGEDCPRQV 38
>UniRef50_Q54UQ7 Cluster: Actin-like protein 6A; n=1; Dictyostelium
discoideum AX4|Rep: Actin-like protein 6A -
Dictyostelium discoideum AX4
Length = 440
Score = 38.3 bits (85), Expect = 0.23
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
DDV+A+V+D G+ K G+AG+D+P+AV
Sbjct: 5 DDVSAIVIDVGTFSTKGGYAGEDSPKAV 32
>UniRef50_A7RPC3 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 64
Score = 38.3 bits (85), Expect = 0.23
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +2
Query: 755 ALVVDNGSGMCKAGFAGDDAPRAV 826
ALV+D GS M K GFAGDDAP+ V
Sbjct: 1 ALVIDVGSHMWKVGFAGDDAPKGV 24
>UniRef50_Q7RSE9 Cluster: Putative uncharacterized protein PY00410;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00410 - Plasmodium yoelii yoelii
Length = 1510
Score = 37.9 bits (84), Expect = 0.31
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -1
Query: 288 TNVEMEQRANYFAATIAYSQLEFINLNCSTNKVYLIIWISKVEYYSIINSK*YCIKMYNL 109
TN+ +R F ++ + E N+ N I+ + + Y I S Y I Y L
Sbjct: 1323 TNINNNKRNTLFKYILSRVKKEQNNIQKQNNFYISILNDTLLILYIIYRSNKYYI--YTL 1380
Query: 108 NCVCTNC--FIFKWVFYKSSINLQYTIYNKQYT 16
N + NC FIFKW YK S L TI NK T
Sbjct: 1381 NFL-KNCIDFIFKWNKYKKSNILMLTINNKSLT 1412
>UniRef50_A2DKQ5 Cluster: Actin 58, putative; n=2; Trichomonas
vaginalis G3|Rep: Actin 58, putative - Trichomonas
vaginalis G3
Length = 373
Score = 37.9 bits (84), Expect = 0.31
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPRAV 826
+V+DNG+G+ KAGFAG +AP++V
Sbjct: 6 IVIDNGTGLTKAGFAGAEAPKSV 28
>UniRef50_Q5KLG9 Cluster: 53 kDa brg1-associated factor b
(Actin-related protein baf53b), putative; n=1;
Filobasidiella neoformans|Rep: 53 kDa brg1-associated
factor b (Actin-related protein baf53b), putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 476
Score = 37.5 bits (83), Expect = 0.41
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+ALV+D GS +AG+AG+D PR V
Sbjct: 6 DEVSALVLDFGSYTTRAGYAGEDCPRVV 33
>UniRef50_Q6C061 Cluster: Actin-related protein 4; n=1; Yarrowia
lipolytica|Rep: Actin-related protein 4 - Yarrowia
lipolytica (Candida lipolytica)
Length = 432
Score = 37.1 bits (82), Expect = 0.54
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+VA LV+D GS + G+AG+D P+ V
Sbjct: 14 DEVATLVIDTGSSYTRVGYAGEDTPKLV 41
>UniRef50_Q9XZB9 Cluster: Actin; n=1; Sterkiella nova|Rep: Actin -
Oxytricha nova
Length = 374
Score = 36.7 bits (81), Expect = 0.71
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPRAV 826
+V+DNGSG KAGF G+D P V
Sbjct: 7 IVIDNGSGFVKAGFVGEDGPSVV 29
>UniRef50_Q4YXY6 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1055
Score = 36.7 bits (81), Expect = 0.71
Identities = 29/91 (31%), Positives = 39/91 (42%)
Frame = -1
Query: 288 TNVEMEQRANYFAATIAYSQLEFINLNCSTNKVYLIIWISKVEYYSIINSK*YCIKMYNL 109
TN+ +R F ++ + E N+ N I+ + + Y I S Y I N
Sbjct: 252 TNISNNKRNTLFKYILSRVKKEQNNIQKQNNFYISILNDTFLILYIIYRSNKYYIYTLNF 311
Query: 108 NCVCTNCFIFKWVFYKSSINLQYTIYNKQYT 16
C + FIFKW YK S L TI NK T
Sbjct: 312 FKNCID-FIFKWNKYKKSNILMLTINNKSLT 341
>UniRef50_Q0H7S7 Cluster: Actin; n=29; Sordariomycetes|Rep: Actin -
Phaeoacremonium sphinctrophorum
Length = 39
Score = 36.7 bits (81), Expect = 0.71
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 782 MCKAGFAGDDAPRAV 826
MCKAGFAGDDAPRAV
Sbjct: 1 MCKAGFAGDDAPRAV 15
>UniRef50_P61163 Cluster: Alpha-centractin; n=356; root|Rep:
Alpha-centractin - Homo sapiens (Human)
Length = 376
Score = 36.7 bits (81), Expect = 0.71
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPR 820
+V+DNGSG+ KAGFAGD P+
Sbjct: 12 VVIDNGSGVIKAGFAGDQIPK 32
>UniRef50_Q22WQ4 Cluster: Actin family protein; n=1; Tetrahymena
thermophila SB210|Rep: Actin family protein -
Tetrahymena thermophila SB210
Length = 444
Score = 36.3 bits (80), Expect = 0.94
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 734 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
M +D+ A+VVD GS +AG++G+D PR V
Sbjct: 1 MFTEDITAIVVDPGSLSIRAGYSGEDTPRLV 31
>UniRef50_Q17GZ9 Cluster: Actin-related protein 5; n=4;
Endopterygota|Rep: Actin-related protein 5 - Aedes
aegypti (Yellowfever mosquito)
Length = 655
Score = 36.3 bits (80), Expect = 0.94
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 752 AALVVDNGSGMCKAGFAGDDAPRAV 826
AA+V+DNGS C+AG+AG D P V
Sbjct: 28 AAIVIDNGSYHCRAGWAGKDVPSLV 52
>UniRef50_Q8TDY3 Cluster: Actin-related protein T2; n=26;
Amniota|Rep: Actin-related protein T2 - Homo sapiens
(Human)
Length = 377
Score = 36.3 bits (80), Expect = 0.94
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 746 DVAALVVDNGSGMCKAGFAGDDAPR 820
D A++ DNGSG CKAG +G+ PR
Sbjct: 8 DSPAVIFDNGSGFCKAGLSGEFGPR 32
>UniRef50_Q4N681 Cluster: Actin, putative; n=3; Piroplasmida|Rep:
Actin, putative - Theileria parva
Length = 380
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPR 820
D+ AL++D GS + KAGFAG + P+
Sbjct: 3 DETLALIIDTGSAVTKAGFAGSETPK 28
>UniRef50_A6R1X8 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 444
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+A+++D G +AGFAG+D P++V
Sbjct: 15 DEVSAIILDPGYSTVRAGFAGEDTPKSV 42
>UniRef50_A7S2B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 265
Score = 35.5 bits (78), Expect = 1.6
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 755 ALVVDNGSGMCKAGFAGDDAPRAV 826
A+V+DNG G+ K GFAGD PR +
Sbjct: 1 AIVLDNGCGISKIGFAGDRVPRII 24
>UniRef50_A2DKP2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 208
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 619 HVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHL---HHTSL 449
H F K + ++ E + F+ W H Y +L ++ CK+C + +
Sbjct: 113 HQFAKALSVYFGKVFDWFQDQYDEKGIYKFVQWAHYYKDLHTKSCKKCGELMIVDSFGAF 172
Query: 448 LPPAWRDFRTLETFHDEC 395
+PP RD E +H C
Sbjct: 173 VPPVIRDPTNGEAYHVCC 190
>UniRef50_A0DAC2 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 205
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -3
Query: 580 MLHFYSPTLPELAVRSFMTWLHSYVNLFSE--PCKRCSCH-LHHTSLLP 443
+LH S TLP F ++ ++NLF + PCK C+ H L+ T++LP
Sbjct: 97 LLHMISATLPVDFDEEFTFKINVFLNLFGQFYPCKECAGHFLNMTTILP 145
>UniRef50_Q4P2E8 Cluster: Actin-related protein 4; n=1; Ustilago
maydis|Rep: Actin-related protein 4 - Ustilago maydis
(Smut fungus)
Length = 534
Score = 35.5 bits (78), Expect = 1.6
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D++ ALV+D G + G+AG+DAPR V
Sbjct: 8 DEINALVIDAGHSSSRVGWAGEDAPRVV 35
>UniRef50_Q00UL2 Cluster: Alpha amylase 1; n=3; Ostreococcus|Rep:
Alpha amylase 1 - Ostreococcus tauri
Length = 913
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1
Query: 825 TARGASSPAKPALHMPEPL 769
TA GASSPAKPAL +PEPL
Sbjct: 5 TAFGASSPAKPALTIPEPL 23
>UniRef50_Q5C683 Cluster: SJCHGC08418 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08418 protein - Schistosoma
japonicum (Blood fluke)
Length = 106
Score = 35.1 bits (77), Expect = 2.2
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPR 820
+VVDNG+G KAG+AGD PR
Sbjct: 9 IVVDNGAGHLKAGYAGDGGPR 29
>UniRef50_UPI0000449ED3 Cluster: PREDICTED: similar to RIKEN cDNA
4921517D21 gene; n=2; Gallus gallus|Rep: PREDICTED:
similar to RIKEN cDNA 4921517D21 gene - Gallus gallus
Length = 321
Score = 34.7 bits (76), Expect = 2.9
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 746 DVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+ A+V+D G G ++G AGD+ PR+V
Sbjct: 11 DLCAVVIDTGMGHTRSGLAGDERPRSV 37
>UniRef50_A4QNT8 Cluster: Si:ch211-241j12.3 protein; n=3; Danio
rerio|Rep: Si:ch211-241j12.3 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 389
Score = 34.7 bits (76), Expect = 2.9
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 713 QTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
Q T D +V+D+GSG+ KAGFA D P AV
Sbjct: 10 QISTATTQMTDYKTPIVLDSGSGLMKAGFADQDLPAAV 47
>UniRef50_Q9P7X7 Cluster: Actin-related protein 4; n=1;
Schizosaccharomyces pombe|Rep: Actin-related protein 4 -
Schizosaccharomyces pombe (Fission yeast)
Length = 433
Score = 34.7 bits (76), Expect = 2.9
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+A+V+D GS + GF+G+D P+ V
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCV 36
>UniRef50_UPI0000F2DE11 Cluster: PREDICTED: similar to
testis-specific actin-related protein 3; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to
testis-specific actin-related protein 3 - Monodelphis
domestica
Length = 939
Score = 34.3 bits (75), Expect = 3.8
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 710 TQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
T +HT ++AA+V+D G+G K G AG+D RA+
Sbjct: 97 TSSHTTASY--KNLAAVVIDTGTGYSKCGLAGEDRTRAI 133
>UniRef50_A4RW28 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 425
Score = 34.3 bits (75), Expect = 3.8
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+A+V+D G+ KAG+AG D P+ V
Sbjct: 5 DEVSAVVIDLGTHSVKAGYAGQDTPQHV 32
>UniRef50_A2EUM6 Cluster: Actin family protein; n=1; Trichomonas
vaginalis G3|Rep: Actin family protein - Trichomonas
vaginalis G3
Length = 360
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPRAV 826
LV+D GSG KAGFAG+D+P V
Sbjct: 8 LVLDFGSGFVKAGFAGNDSPSLV 30
>UniRef50_A5E2K2 Cluster: Actin; n=5; Saccharomycetales|Rep: Actin -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 417
Score = 34.3 bits (75), Expect = 3.8
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPR 820
+VVDNG G KAGFAG++ PR
Sbjct: 10 VVVDNGLGTLKAGFAGEEKPR 30
>UniRef50_UPI0000F2D326 Cluster: PREDICTED: similar to actin; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to actin -
Monodelphis domestica
Length = 378
Score = 33.9 bits (74), Expect = 5.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 749 VAALVVDNGSGMCKAGFAGDDAPRAV 826
+ + + DNGSG+CK G +G+ PR +
Sbjct: 9 IPSAIFDNGSGLCKVGISGEQNPRFI 34
>UniRef50_UPI00006CB6F4 Cluster: Erv1 / Alr family protein; n=1;
Tetrahymena thermophila SB210|Rep: Erv1 / Alr family
protein - Tetrahymena thermophila SB210
Length = 659
Score = 33.9 bits (74), Expect = 5.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 631 ESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSE--PCKRCSCH 467
E +++ R N +LH S T P F+ + ++NLF + PCK CS H
Sbjct: 536 EKHYNITRTELGNCGWMVLHMISATYPLEVNEEFVEKTNLFLNLFGQFYPCKECSGH 592
>UniRef50_Q18PR4 Cluster: Actin-related protein; n=1; Porphyra
yezoensis|Rep: Actin-related protein - Porphyra
yezoensis
Length = 573
Score = 33.9 bits (74), Expect = 5.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 740 DDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D V ++V D GS CK GFAG+D P ++
Sbjct: 5 DGTVPSVVFDFGSHTCKVGFAGEDLPHSL 33
>UniRef50_Q7RBW3 Cluster: Putative uncharacterized protein PY06023;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06023 - Plasmodium yoelii yoelii
Length = 819
Score = 33.9 bits (74), Expect = 5.0
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -1
Query: 168 KVEYYSIINSK*YCIKMYNLNCVCTNCFIFKWVFYKSSINLQYTIYNKQYTI*KK 4
K ++Y+I+ + K Y N +N F K FY+SSI YT+ N YT+ +K
Sbjct: 483 KNDHYNILEDERSNFKKYYFNLYFSNYFKTKKTFYRSSIITPYTMCN--YTLMRK 535
>UniRef50_Q6C0A9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 427
Score = 33.9 bits (74), Expect = 5.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V ++V++ GS + GF+GDD P+ V
Sbjct: 18 DEVTSIVIECGSSYTRVGFSGDDLPKVV 45
>UniRef50_Q11NV5 Cluster: Membrane protein; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: Membrane protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 808
Score = 33.5 bits (73), Expect = 6.6
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 479 MQLSFTSHISVATSVEGLPYIRNIS-R*VQA--IVIVVLNVGASSSLVQYYKFFKWTILC 309
+ +F +V T GLPY+R I R VQA +VL++ +SL+ Y+ F +
Sbjct: 187 LSATFKKETNVETHFAGLPYVRTIMVRDVQAEFKFFLVLSI-LVTSLILYFFFRNLYAVF 245
Query: 308 KKVLIVKLMLRWNKGPIIL 252
L++ + + W G I+L
Sbjct: 246 FTFLVIVVTVVWTMGTIVL 264
>UniRef50_Q54E71 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 684
Score = 33.5 bits (73), Expect = 6.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPRAV 826
+++DNGS C+AGFA D +P+ +
Sbjct: 33 IIIDNGSYQCRAGFANDISPKLI 55
>UniRef50_A2QI94 Cluster: Contig An04c0110, complete genome; n=8;
Pezizomycotina|Rep: Contig An04c0110, complete genome -
Aspergillus niger
Length = 870
Score = 33.5 bits (73), Expect = 6.6
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -3
Query: 619 HVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHLHHTSLLPP 440
H+ ++T L FY+P++PEL VR + + L E C T LP
Sbjct: 623 HLCHRLTRLVIDLPLRFYNPSMPELEVRPMLREAFKRLTLLEEFCSAADDLCLDTQKLPY 682
Query: 439 AW 434
W
Sbjct: 683 IW 684
>UniRef50_O96019 Cluster: Actin-like protein 6A; n=63;
Eumetazoa|Rep: Actin-like protein 6A - Homo sapiens
(Human)
Length = 429
Score = 33.5 bits (73), Expect = 6.6
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPR 820
D+V ALV D GS +AG+AG+D P+
Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPK 34
>UniRef50_UPI00005864C8 Cluster: PREDICTED: similar to Actin; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Actin - Strongylocentrotus purpuratus
Length = 383
Score = 33.1 bits (72), Expect = 8.7
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 740 DDDVAALVVDNGSGMCKAGFAGDDAPRA 823
DD +VVDNGSG +AGFAG RA
Sbjct: 6 DDGPDPVVVDNGSGTIQAGFAGGKTCRA 33
>UniRef50_Q8IDZ2 Cluster: Putative uncharacterized protein
PF13_0184; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0184 - Plasmodium
falciparum (isolate 3D7)
Length = 1335
Score = 33.1 bits (72), Expect = 8.7
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 288 TNVEMEQRANY-FAATIAYSQLEFINLNCSTNKVYLIIWISKVEYYSIINSK*YCIKMYN 112
TN+ + +NY A I + + EFIN+ C TNK + I + +SI N +K+YN
Sbjct: 776 TNMSFIKTSNYKHIANITFEKNEFINI-CKTNKKFNKIACLTNKKFSIYNFNMTNMKIYN 834
Query: 111 LNCVCTNCF 85
+ N F
Sbjct: 835 YDISKLNFF 843
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,698,336
Number of Sequences: 1657284
Number of extensions: 14652118
Number of successful extensions: 34611
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 33146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34583
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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