Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30092
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   6.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 508 HNYAAKS*MTLLPALVMLVSRSVTLLHEHFLLLS*IHGDV 627
           HN + ++   + P  ++ ++R V L  EH      +H D+
Sbjct: 579 HNMSFENDFIIQPKHLLSIARQVALGMEHLAKTRVVHRDL 618


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 562 PTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHLHHTS 452
           PT+P++    F T   S      +P  R SC   +TS
Sbjct: 209 PTVPKIPPAEFPTTSSSSALESPDPASRSSCLGSNTS 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,082
Number of Sequences: 336
Number of extensions: 4359
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)