Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30090
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    26   0.33 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.4  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.4  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +2

Query: 698 DRRPRNFWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKAL 841
           D+ P N    ++ +   K D+E+       DL   ++  +Q + H+ L
Sbjct: 280 DKNPENTLGTMLSIHPSKLDVEQMNLLHSNDLNMHQQHHQQNMSHEEL 327


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 604  KTKEQLEEEKK 636
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 604  KTKEQLEEEKK 636
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 604  KTKEQLEEEKK 636
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 604  KTKEQLEEEKK 636
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 695 SDRRPRNFWECIVKLETEKYDLEERQK 775
           SDR  +N++ C+++  T   D EE +K
Sbjct: 39  SDRLLKNYFNCLMERGTCSPDGEELKK 65


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 184 SRPSIAGEGDPEFIKR 231
           SR  +AG+ DPE  KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 184 SRPSIAGEGDPEFIKR 231
           SR  +AG+ DPE  KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.128    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,208
Number of Sequences: 336
Number of extensions: 2151
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)