Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30090
(852 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 41 0.001
05_01_0146 - 953957-956278,956468-956786,957185-957213 34 0.13
03_06_0155 - 32031370-32031707,32033066-32033279 34 0.17
03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512 32 0.50
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 32 0.67
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 30 2.0
05_04_0158 + 18613265-18615304 30 2.7
11_06_0722 - 26678873-26680843 29 4.7
02_05_0828 + 32057670-32057851,32060054-32060132,32060808-320608... 29 4.7
02_03_0357 + 18075171-18077240 29 4.7
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 29 6.2
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335... 28 8.2
02_02_0363 + 9446055-9446524,9446658-9446771,9446856-9447281,944... 28 8.2
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Frame = +1
Query: 457 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 636
E+ ++ ++ + AMLQ +KD N +Q+K ++ ++E +TK Q +E
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYH 1490
Query: 637 ISLSIRIKPLTIEGLSVD---KLRQKAQ-ELLGVHRQTRD------REIRSRREAKETGL 786
++ + L +E L K R+KA+ E+L ++ D E++ R +ET
Sbjct: 1491 ELKDVKEQKLCLERLDSSKETKRRRKAESEMLSALKKVHDLEHQYLNELKRREAVEETFA 1550
Query: 787 RLKRAQRKTK 816
R K ++TK
Sbjct: 1551 RQKEEIQETK 1560
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 34.3 bits (75), Expect = 0.13
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAM----LQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKE 615
++++ +E + K A+ + + D +++ F ++ E FGL + RNK +
Sbjct: 396 LQDRESEIEVLKGKTTALEIEVARLLADVNESNEQFDASQQ-EVFGLQTTIDVLRNKLEA 454
Query: 616 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLK 795
E + + + + IEGL+ + ++ L+ +TRDRE + +R ++ L
Sbjct: 455 AEEAASEALNNEKAANVKIEGLTEENVK-----LISELNETRDREEKEKRAVEDLTAALS 509
Query: 796 RAQRKTKAATEAQSSQE 846
K K A E S+E
Sbjct: 510 EESDKAKEAHERYLSKE 526
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 630
IEE +QR EEA + +Q + +A K + + + G+ + R K+ E L E+
Sbjct: 98 IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157
Query: 631 KKIS 642
+K++
Sbjct: 158 RKLT 161
>03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512
Length = 957
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 722 ECIVKLETEKYDLEERQK--RQDYDLKELKERQKQQLRHKA 838
E +VK E EK DLE + R+ L E+KER+K RHKA
Sbjct: 670 ELVVKREKEKQDLERELELYRRKVHLFEVKERRKMS-RHKA 709
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 448 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 627
+I E+R+R + ++ A+L+AMK+ N ++ E N +LE K+QL+E
Sbjct: 41 EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97
Query: 628 EK 633
+
Sbjct: 98 SE 99
>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 30.3 bits (65), Expect = 2.0
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +1
Query: 451 IEEKRQRLEEAE-KKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 627
IEEK Q + A + ++ML+ KD + T +T K ENF S+A+ + K +E+
Sbjct: 793 IEEKVQSVRNAVIAEFKSMLRESKDITSTS-RWT--KVKENFR-SDARYKAMKHEEREVA 848
Query: 628 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGL-RLKRAQ 804
+ ++ E + KL ++A+ + R+RE+R R+E +E + R+K
Sbjct: 849 FNEYIAELKSAEKEAEQAAKAKLDEQAK------LKEREREMRKRKEREEQEMERVKLKI 902
Query: 805 RKTKAATEAQS 837
R+ +A + Q+
Sbjct: 903 RRKEAVSSYQA 913
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 454 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKK----SENFGLSNAQLERNK 606
+EK ++ +E E K Q L +AMK KTG N I+KK +E +A++ ++K
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667
Query: 607 TKEQLEEEKKI 639
++ +E KKI
Sbjct: 668 VEKIQDEAKKI 678
>11_06_0722 - 26678873-26680843
Length = 656
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 601 NKTKEQLEEEKKISLSIRIKPLTIEGLSVDK-LRQKAQELLGVH 729
NKTK+ +E+K++ LS+ +K IE L ++ L Q ++ +H
Sbjct: 418 NKTKKGRKEDKRVRLSMDVKKTVIETLKKNRGLGQLGNCVISLH 461
>02_05_0828 +
32057670-32057851,32060054-32060132,32060808-32060869,
32060993-32061092,32061169-32061210,32062057-32062098,
32062189-32062343,32063609-32063636
Length = 229
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +1
Query: 592 LERNKTKEQLEEEKKISLSIR-IKPLTIEGLSVDKLRQKAQEL-LGVHR--QTRDRE 750
LE +K E+ + SL +R ++ +EGLS+D+L+Q + L G+HR T+D++
Sbjct: 88 LEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQ 144
>02_03_0357 + 18075171-18077240
Length = 689
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 547 TIQKKSENFGLSNAQLERNKT-----KEQLEEEKKISLSIRIKP 663
+I++K +NF L+ ++ RN+T QL EE KIS+S + P
Sbjct: 594 SIKEKFKNFNLAFEEIYRNQTTWKVPDPQLREELKISISENVIP 637
>02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 28.7 bits (61), Expect = 6.2
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +1
Query: 589 QLERNKTKEQLEEEK-KISLSIRIKPLTIEGLSVD--KLRQKAQELLGVHRQTRD---RE 750
Q +NK ++Q+EE ++ L R++ E S + KL+QK QEL +T+D RE
Sbjct: 900 QAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKSQENKKLQQKLQELELQSNETKDLLKRE 959
Query: 751 IRSRREAKETGLRLKRAQRKTKAATEAQSSQE 846
+ + A E + Q T E + E
Sbjct: 960 QETAKAAWEKAALVPEVQVDTTLVNELTAENE 991
>09_04_0161 -
15232074-15232139,15232299-15232406,15233417-15233506,
15233617-15233733,15234408-15234527,15234930-15236168
Length = 579
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 188 DRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFLVP 367
D SR + ++ S T + R S TS N P+R S++ + S PS+R P
Sbjct: 38 DVASRYKNGLSAHSAATTARRCTSPSPGRTSANECTPEPKRAQSADRRRPSTPSSRVSTP 97
>02_02_0363 +
9446055-9446524,9446658-9446771,9446856-9447281,
9447812-9447893,9447964-9448020,9448633-9448881,
9448978-9449109,9449163-9449291
Length = 552
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 648 HPHQAADHRGSLRRQTPTEGPGTSGSASSNSRPR 749
H H A HR SL T + P +S +++++++P+
Sbjct: 230 HNHSAPTHRNSLAGTTRNKLPSSSAASAASAQPQ 263
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,533,159
Number of Sequences: 37544
Number of extensions: 279039
Number of successful extensions: 1085
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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